KEGG   Tateyamaria omphalii: BWR18_16560
Entry
BWR18_16560       CDS       T04652                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
tom  Tateyamaria omphalii
Pathway
tom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BWR18_16560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tom03021]
    BWR18_16560
   03019 Messenger RNA biogenesis [BR:tom03019]
    BWR18_16560
Transcription machinery [BR:tom03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BWR18_16560
Messenger RNA biogenesis [BR:tom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BWR18_16560
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 ATPase_2 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: APX13117
UniProt: A0A1P8MYF1
Position
3301662..3302933
AA seq 423 aa
MTAERLALADLKAQSPKDLLSTAEELEIENASTMRKGEMMFQILRERADEGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQYSLRTGDTIEGVIKAPDDTERYFALTN
ATKINFEEPERAKHKIAFDNLTPLYPDERLTLEKKDPTTKDRSARIIDLVAPIGKGQRSL
IMAPPRTGKTVLLQNIASSIEQNHPECYLIVLLIDERPEEVTDMQRSVQGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATGLIETGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVDKVDLAKTFVLRRILNPMGTTDAIEFLISKLKQTKTNSEFFDS
MNT
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaccgcagaacgcctcgcccttgctgacctcaaggcgcaaagccccaaagacctcctt
tccaccgcagaagagcttgagatcgaaaacgcctcgaccatgcggaagggcgaaatgatg
ttccagatcctgcgcgagcgcgcggacgagggatgggaaatttctggcgatggcgtgctg
gaggttcttcaggacggctttggctttcttcgctccccagaggcgaattatctgccaggt
cccgatgacatctatgtctcgcccgatatgatccggcaatattcactccgcaccggcgac
acgattgaaggggtgatcaaggcgcccgacgataccgagcgttactttgccctgaccaat
gcgaccaagatcaactttgaagagcccgagcgcgccaagcacaagattgcctttgacaac
ctgacgccgctttatcccgatgaacggctgacattggaaaagaaagacccgacaaccaag
gatcggtcggcacgcatcatcgacctggtagccccgatcgggaaagggcagcggtcattg
atcatggctccgccgcgcaccggtaagacggttcttctgcaaaacatcgcgtccagcatc
gaacagaaccatccagaatgttacttgatcgttttgctgattgacgagcgccccgaagag
gtgaccgacatgcagaggtcagttcagggggaagtcgtgagttccacctttgacgaaccg
gcgactcgccacgtggcggtttcggaaatggtgattgaaaaagccaagcgccttgtggaa
cataagcgagatgttgttatccttttggattcgatcacaagacttggtagagcattcaac
actgtcgtgccatcgtccggtaaggtgctgacaggtggtgttgatgccaacgcattgcag
cgccccaaacggttctttggtgctgcgcgtaacatcgaagaaggtggatcgctgaccatc
attgcaacgggtctgatcgagaccggcagccgcatggatgaggtgatctttgaagaattc
aagggcactggtaactctgaaatcgtcctggatcgtaagattgcagacaagcgcgtgttc
cccgcgatcgacattctcaagtccgggacgcggaaagaggatctgctggtcgacaaagtc
gatctggccaagacatttgtgctgcgccgcatcctcaacccgatgggcacgaccgacgcg
attgaattcctgatctcaaagttgaaacagaccaagacgaacagcgagttctttgactca
atgaacacctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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