KEGG   Treponema pallidum Fribourg-Blanc: TPFB_0071
Entry
TPFB_0071         CDS       T02651                                 
Symbol
clpB
Name
(GenBank) S14 family endopeptidase ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tpb  Treponema pallidum Fribourg-Blanc
Brite
KEGG Orthology (KO) [BR:tpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:tpb03110]
    TPFB_0071 (clpB)
Chaperones and folding catalysts [BR:tpb03110]
 Heat shock proteins
  HSP100
   TPFB_0071 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 AAA_16 AAA_22 Sigma54_activat nSTAND3 TniB AAA_7 ATPase_2 AAA_18 AAA_24 NACHT bpMoxR IstB_IS21 AAA_25 T2SSE
Other DBs
NCBI-ProteinID: AGK83712
Position
complement(75908..78544)
AA seq 878 aa
MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFL
YDELLQCLRRKPRVTGPAAQTRCAPTLSKACARAERLALKNQDEYVSCEHLLLAISETDS
NTARLLHSQGITSKTISAALKDIRGSKRVTSQDPESTFQCLEKYCRDLTTLAREEKIDPV
IGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSL
DLGALVAGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLK
PALARGELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVH
HGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKIL
QLNIEKASLLKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELE
RLRIEETMFSREGDLNKAAELRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDI
AKIISMWTGIPVSKMMASEQQKYLQLESVLMQRVVGQDEAVRVISDAIRRNKAGLSDTRR
PLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGY
DEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIM
TSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLI
FKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQ
TELENALAREILSGRFRGGSTIVVDMCKDALCFTEQTS
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgaacacagacaggtacacggtcaaagcaagcgaagcgctcaatgacgccatatctctg
gcagaagcggagaaccacggtcaagttgaggaggaacatctactccacgccctactttcc
cagaaagacgggattatctctccgctcattgaaaaaattggggcaaaaccggacttcctg
tacgatgaattactccaatgcctgcgccgcaaaccacgtgttaccggtcctgccgcccaa
acgcgctgtgcaccaacgctgagcaaagcctgtgcacgtgcagaacgcctcgcgctcaag
aaccaagatgaatatgtctcctgcgaacatctcctgcttgccataagtgagacagatagc
aacactgcacgtctccttcacagtcagggcattaccagtaaaactatcagtgccgccctc
aaagatatacgcggcagcaagcgcgttacgagccaggatccagaatcaacattccagtgc
ttggagaaatactgccgagatcttactaccctcgcccgagaagaaaaaatagatccggtt
attggacgtgatgaagagatccggcgcgttatgcaggtactctcacgtcgtacaaaaaat
aacccagtgcttattggagaacccggcgtagggaaaaccgctattgtcgagggacttgca
cgccgtatcgtttcaggagacgtaccagaaagcctcaagggaaagcgtttgctttccctt
gacctcggcgcattggttgccggtgcaaagttccgcggggaatttgaagaacgactaaaa
gcggtaattgaagcggtacagaaaagcgacggtggcgttattttattcattgatgaacta
cacacgctcgtaggcgccggcgcaagtgagggatctatggatgcgtcgaaccttctgaaa
cctgcgcttgcgcgcggtgaattgcgttcaatcggcgcaaccacgctcaacgaatatcgc
aaatatatcgaaaaggacgcagcgctcgaacgccgctttcagcaagtgtactgcgtacag
cctacggtggaggacaccattgctatcctgcgcggtttgcaagaaaagtacgaagtgcat
cacggggtacgtatcaaagatgaagcgcttgttgcagcaaccgttttgtctgaccgttac
atcaccaaccgctttttaccagataaggcgattgatctggtggatgaagcagcaagccgc
ctgaaaatggaaattgaaagtcagcctgttgagctagaccaggtggagcgcaagatatta
cagctgaatatcgaaaaggcctctctccttaaagaaagtgatccggcttcaaaggaacgt
ttggaaaagttagaaaaagagctcgcaggcttcctagagcgccgtgctgcaatgcaggtc
caatggcaaaatgagaaagggaggatagaagagtcacgccgctacaaagaggagcttgag
cgtctccgcattgaggaaaccatgttttcacgtgaaggggacctgaacaaggctgcagaa
cttcggtatggcaaaattccagaacttgaaaaaaaaatcatgcttcttactgcagaagta
gagaaaaaatccggtctagaaggacagctcttgcgcgaggaagtgtgtgaagaggacatt
gcgaaaattatttctatgtggaccggaattccggtatccaaaatgatggcaagcgagcaa
cagaaatatctgcagcttgagtcagtactcatgcaacgtgtggtagggcaggacgaagca
gtgcgggtaatttccgacgcgattcgtcgtaataaggcaggactttctgatacgcgccgt
cctcttggcagtttcttatgtgtcggtcccacgggggtaggaaagacagaacttgcacgt
acgttagctgattttcttttcaacgatgagcgtgcactgacgcgtatcgatatgagtgaa
tacatggaaaaacacgcgatcagccgactcattggcgcgcccccggggtatgtgggctat
gacgaggggggacaattgacagaagcggtacgacgtagaccctacagcgtacttcttttt
gatgaagtagagaaagcgcaccaggatgtgtttaatatattcctgcaaatactcgacgat
gggcgcttgactgacggccaaggaagggtggtggatttccgcaacacgatcatcatcatg
accagcaatatcggatcagagcatattctttctgcacgcgagtcgcgcacacacacgtcg
gacttgcctgtacccgagacacaatctacagaagaacaaactctaccagagcagatacgg
ggattactgcacacatactttcgcccagaattcttaaaccggattgacgaagtgttaatt
tttaagcgtctcacacggaaacatattcgcctcatcacagacatccaactgcagatggta
gtggagcgtttggaaagtcgacatataaaacttcgtgtgcgtgacgcggcgaaagcctat
cttgcggagcgcggatacgacgacactttcggagcacgaccactgaagcgtgcaatccaa
acggaattggaaaatgccctagcgcgtgagattctcagtggccgattcagaggcggctca
actatcgtggtggatatgtgtaaagatgctctgtgtttcactgaacaaacatcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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