KEGG T02651: TPFB

Treponema pallidum Fribourg-Blanc: TPFB_0091

Entry

TPFB_0091         CDS       T02651

Symbol

cysS

Name

(GenBank) cysteine--tRNA ligase

K01883

cysteinyl-tRNA synthetase [EC:6.1.1.16]

Organism

tpb Treponema pallidum Fribourg-Blanc

Pathway

tpb00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:tpb00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    TPFB_0091 (cysS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tpb01007]
    TPFB_0091 (cysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpb03016]
    TPFB_0091 (cysS)
Enzymes [BR:tpb01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     TPFB_0091 (cysS)
Amino acid related enzymes [BR:tpb01007]
Aminoacyl-tRNA synthetase
  Class I (G)
   TPFB_0091 (cysS)
Transfer RNA biogenesis [BR:tpb03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    TPFB_0091 (cysS)
Prokaryotic type
    TPFB_0091 (cysS)

SSDB

Motif

Pfam:

tRNA-synt_1e DALR_2 tRNA-synt_1g tRNA-synt_1d tRNA-synt_1c

Other DBs

NCBI-ProteinID:

AGK83734

Position

99995..101557

AA seq 520 aa
MALRVYNTLTRQQEHFQPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTLHFLGY
RVTYVMNITDVGHLESDADSGEDKLVRSAQAHGHSVLQVAAHYRAAFFRDTALLGIEEPS
IVCNASDCIQDMIAFIEQLLARGHAYCAGGNVYFDVRSFPSYESFGSAAVEDVQEGEDAA
RARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGRGYPGWHIGCSAMSMKFLGPRCD
IHIGGVDHIRVHHRNERAQCEAITGAPWVRYWLHHEFLLMQLQKRAVHADMGSSVVSSFS
KMSKSCGQFLTLSSLQERGFQPADFRFFLLSGQYRTQLAFSWDALKTARAARRSFVRRVA
RVVDAARATTGSVRGTSAECAAERVCESRASESELLLTDFRAALEDDFSTPRALSALQKL
VRDTSVPPSLCVSALQVADTVLGLGIIQEATASLSAQVPAGDTLPQRPLPSEEWIGQLVR
ARAHARQTRDFPRADEIRRQLKAEGIELEDTHLGTIWKRV

NT seq 1563 nt +upstreamnt +downstreamnt
atggccttgcgcgtatacaacacccttactcgtcagcaagagcactttcaaccctgggag
cacgggcacgtgcgtctctacggttgtgggcctacggtgtacaattatccccatctgggg
aatctgcgcgcatacgtttttcaggatacggttcgacgtaccttgcactttcttggatac
cgcgtcacctacgttatgaatattaccgacgttgggcatttagaaagtgacgcagacagt
ggtgaggataagctggtaaggagcgcacaggcgcatggccactcggtgttgcaggttgca
gcgcactatcgcgcagcctttttccgcgatactgcactgctcggtattgaagagccgtcc
attgtctgtaatgccagcgattgtatccaggatatgatcgcgtttatcgagcaattgctc
gcgcgtgggcacgcgtactgtgcaggagggaacgtgtattttgatgtgcgatcctttcct
agctacgaaagcttcggttctgccgcggtagaagatgttcaggaaggagaggatgcggcg
cgcgcgcgggtggcacacgatacgcataagcgtgatgcacgtgattttgtgctgtggttt
acccgtagtaaatttgtgcgtcatgcgttgacgtgggattctccgtgggggcgggggtac
cccgggtggcacatcgggtgttctgcaatgagcatgaagtttttaggaccacgttgcgac
atccacatcggaggggtggatcatattcgtgtgcatcaccgtaacgagcgtgctcagtgt
gaagcaattactggtgcaccctgggtgaggtactggttacaccacgagttcttgctgatg
cagctgcaaaagcgcgcagtacatgcggatatgggcagttcggtggtgtcgtctttttct
aaaatgtccaagtcctgtgggcagtttttgacgctttcttcgctgcaggagcgtggcttt
cagccagctgattttcgcttctttttgttgagtggacagtatcgcacgcaacttgctttt
tcttgggatgcgctaaaaacggcgcgtgccgcccgacggagttttgtgcggcgagtggcg
cgtgtagtggacgctgctcgagcaactacaggcagcgtgcgcggcactagtgcagagtgt
gccgcagaaagggtgtgtgaatcgcgcgcatcagaatctgagctgctcttaactgacttt
cgtgctgcgttggaggatgacttttctacgccacgtgctctgagcgccttacaaaaattg
gtgcgtgatacctcggtgccgccatcgctgtgtgtttcggcactccaggtggcggataca
gtgctagggttaggcataatacaggaagcgaccgcatcgctatctgcgcaggttcctgct
ggcgatacgttgccgcagcgtcctttaccgagtgaggagtggattggacagttggtgcgt
gcgcgtgcacatgcacgccaaacgcgtgattttccccgtgcagatgagatccgtcggcag
ttgaaggctgaagggattgaacttgaagacacccatcttgggactatttggaagcgcgtg
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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