KEGG   Thermococcus peptonophilus: A0127_08340
Entry
A0127_08340       CDS       T04728                                 
Name
(GenBank) Nonsense-mediated mRNA decay NMD3 like protein
  KO
K07562  60S ribosomal export protein NMD3
Organism
tpep  Thermococcus peptonophilus
Brite
KEGG Orthology (KO) [BR:tpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpep03009]
    A0127_08340
Ribosome biogenesis [BR:tpep03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    A0127_08340
SSDB
Motif
Pfam: NMD3 EFP DUF4222 Prominin
Other DBs
NCBI-ProteinID: AMQ19169
UniProt: A0A142CWL7
Position
1551265..1552440
AA seq 391 aa
MSERFCYRCGISEREGGPLIEGLCQVCYRKENPVLLIENEINTELCQNCGSYKRRGVWVD
PQSYELEELIFEVAENALLEALEDSFSDKIREYEVVPPEELEETEEIPLGRAVVAFEPVG
YHIEYFPAIITYEVRVKARTHELQKELHDERKRVTVYVRQTVCPRCQKFLGGYFEAILQV
RAEDRPLTEEEREAIGKLVEEKVDEIMRRDRMGFIQDTIEKEEGLDFYMGSTSAARKLAQ
AIKERFGGKISEAYELVGMDRQTSREVYRTSVSVRIPKFQRGDIVTDRRGTVYEVERVDG
KGMTLRNLSTGKSEHKDWKTLGREGVNTVEHEESEAMVTSIGRDEVQLMDMESYETYEIE
KPGVELTEGDVYRVVSVKGKRYIRGRKEEEK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgagcgagaggttctgttacaggtgtggaataagcgagcgagagggtgggccgctcatt
gagggtctctgccaggtgtgctaccgaaaagaaaatccagtccttctcatcgagaacgaa
ataaacacggagctctgccagaactgcgggagctataagaggaggggtgtgtgggtcgac
ccccaaagctacgaacttgaggagctcatatttgaggttgccgaaaacgccctgcttgag
gcccttgaggattccttcagcgacaaaatccgcgagtacgaggtcgtaccacctgaggag
cttgaagaaacggaagaaatccccctcggcagggcggtcgtcgccttcgagccagtgggt
taccatatagagtacttcccggccataataacatacgaagtccgcgttaaggctaggacc
cacgagctccagaaggagcttcacgacgagcggaagagggtcacagtgtacgttcgccag
acggtctgcccgcgctgtcagaagttcctcggcggctatttcgaggctatactccaggtc
agggctgaggacagacccctgacggaggaagaaagagaggctatcggaaagctcgtcgag
gagaaagtggatgagataatgcgcagggacaggatgggctttatccaggacacgatagag
aaggaagagggtctggacttctacatgggttcaaccagcgccgcgagaaagctggcccag
gccataaaggagcgcttcggtggaaagataagcgaagcctacgagctcgtgggcatggac
aggcagacgagcagagaggtttacaggacgagcgtcagcgtcagaatacccaagttccag
aggggagatatagtcacagataggaggggaaccgtttacgaagtcgagagggttgacggc
aaaggcatgaccctgcgcaatctctccacggggaagagcgagcacaaggactggaagacc
cttggcagggagggagttaatacagtcgagcacgaggagagcgaggcgatggttacgagc
atagggagggacgaagtccagctcatggatatggagagctatgagacctacgaaattgaa
aagccaggagttgagcttaccgagggtgatgtttatagagttgtttctgtgaaagggaag
cggtacatacgcggccgcaaggaagaagaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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