KEGG   Tetrapisispora phaffii: TPHA_0A03310
Entry
TPHA_0A03310      CDS       T02235                                 
Symbol
TPHA0A03310
Name
(RefSeq) hypothetical protein
  KO
K12597  protein AIR1/2
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPHA_0A03310 (TPHA0A03310)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0A03310 (TPHA0A03310)
   03016 Transfer RNA biogenesis [BR:tpf03016]
    TPHA_0A03310 (TPHA0A03310)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     TPHA_0A03310 (TPHA0A03310)
Transfer RNA biogenesis [BR:tpf03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    TPHA_0A03310 (TPHA0A03310)
SSDB
Motif
Pfam: zf-CCHC AIR2-like_ZnK4 zf-CCHC_2 zf-C2H2_10 zf-CCHC_4
Other DBs
NCBI-GeneID: 11532627
NCBI-ProteinID: XP_003683842
UniProt: G8BND0
Position
1:complement(728149..729303)
AA seq 384 aa
MSSLNETESMDSLPFVKEVTPSRESSVVKIVAPSIEEVTGNPEELRALRGQGRYFGMSEA
DGGFMESEPKCNNCSQRGHYKRDCPHVICTYCGSMDDHYSQHCPKAIMCSNCSEKGHYKS
QCPKKWKRVFCILCNSKLHSRDRCPSVWRVYLLKETKKNEKRHLPMHLIFCYNCGLKGHF
GDDCNRRRSSRVPLDDGSAFSGDNVCDELKEEYFQNLTDFKRESRYDYDITNDSFDYNDY
EYENEAYDGNDYVGRYNGNSSNSNSRNKNKKRQYSNFNPPPYQDERRHKRSKKSDNGRNS
RSGNSSNNNNNNNNNNNNNNKTSTTSHPLDFPRNNNRSNNRSNSNSNGARNTDKTRHGKS
KSNKSKDSRHNKHRSHNAHKFERQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgagttctttaaatgaaactgaatcaatggacagtttaccgtttgtgaaagaggttact
ccttcgagagaatcttcagtggtcaagatcgtcgctccctctattgaagaggtcacaggt
aatcctgaggaattgagggctttgagagggcaaggtcgttatttcggtatgtccgaagca
gatggtgggttcatggaatctgaaccgaaatgtaataattgttctcaaagaggtcattat
aagagggattgtccccatgtgatctgtacttactgcgggtctatggatgaccattactca
cagcattgtccaaaggctatcatgtgtagtaattgttctgaaaagggtcattataaatca
caatgtcctaagaaatggaaaagagtattttgcattttatgtaatagtaaactgcattca
agagatagatgtccaagtgtgtggagagtttatttattgaaagaaactaagaaaaatgaa
aaaagacatttacctatgcatttaatattttgttataattgtggattgaaaggccatttt
ggtgatgattgtaatagacgacgttcttcgagggttcctttggatgatggcagtgcattt
tctggtgataacgtttgtgatgagttaaaggaagagtattttcaaaatttaacagatttt
aaaagagaaagccgttacgattatgatatcacaaatgattcttttgactataatgattat
gaatatgaaaacgaagcttatgatggaaatgattatgtaggaagatataatgggaacagt
agtaacagcaacagcagaaacaaaaataagaaaagacagtactctaatttcaatccgcca
ccataccaagatgaaagaaggcataagagatcaaagaaatctgacaatggaagaaattct
agaagtggaaatagtagtaataataataataataataataataataataataataataat
aagacatctactacctcacatcctctggatttcccacgtaataataacagatccaataat
cgttcaaattcaaattcaaatggtgcaagaaacacagataagaccagacacgggaaatca
aaatccaataaatccaaggattcaagacacaataagcacaggtctcataacgctcataag
tttgaaagacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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