KEGG   Tetrapisispora phaffii: TPHA_0J02110
Entry
TPHA_0J02110      CDS       T02235                                 
Symbol
TPHA0J02110
Name
(RefSeq) hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03013  Nucleocytoplasmic transport
tpf03015  mRNA surveillance pathway
tpf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TPHA_0J02110 (TPHA0J02110)
  09122 Translation
   03013 Nucleocytoplasmic transport
    TPHA_0J02110 (TPHA0J02110)
   03015 mRNA surveillance pathway
    TPHA_0J02110 (TPHA0J02110)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0J02110 (TPHA0J02110)
   03041 Spliceosome [BR:tpf03041]
    TPHA_0J02110 (TPHA0J02110)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     TPHA_0J02110 (TPHA0J02110)
Spliceosome [BR:tpf03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    TPHA_0J02110 (TPHA0J02110)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 11533073
NCBI-ProteinID: XP_003687465
UniProt: G8BYT9
Position
10:complement(472245..473024)
AA seq 259 aa
MSLAEFDEIKYDHSAERLDKPSLYLLKKARKNRANGLEQLRESTKSGTIYVGNLSFYTSE
EQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFVIFNTPEEALNAVKYLGDTKLDDRVITI
DLDPGFEDGRQFGRGKSGGQVSDELKFEFDASRGGFAIPLANRIGNNNEVANNFGQNKFN
QHNHSHHGRNFNGGRRNRFGSHQHIPSQKQQHMQSEGADQDMFPQSFPDNNENQDDAYSN
LQNSDDNVNMGVEDTYIPE
NT seq 780 nt   +upstreamnt  +downstreamnt
atgtcattagcggaatttgatgaaattaagtatgaccactctgctgagagattggataaa
ccttcattgtatcttttgaagaaggctagaaaaaaccgtgctaatggtttggagcaactg
cgtgagtcaacaaaatcaggtactatttacgttggtaatctatccttttacacttcagaa
gaacaaatttatgaattattttctaaatgtgggtttataaaaagaattattatgggtcta
gataggtttaaatttactccatgtgggttctgttttgttatatttaatactccagaagag
gctctaaatgctgtgaagtatttaggtgacactaaactggacgacagagttatcacgatt
gatttagatcctggttttgaagatggaagacagtttggtagaggcaagagtggtggccaa
gttagtgatgaattgaaattcgaattcgatgcgtctagaggtgggtttgctattccactg
gctaatcgtatcggtaataataatgaggtagctaataacttcggtcaaaacaaatttaat
caacacaaccattcacaccacggtagaaactttaacggcggaagaagaaatagatttgga
tcacatcaacatatcccctctcaaaaacaacaacacatgcaaagcgaaggtgctgatcaa
gatatgttcccacaatctttcccagataataacgaaaaccaagatgacgcttacagtaat
ctgcaaaacagcgatgataacgttaacatgggtgtagaagatacatacatacctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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