KEGG   Tetrapisispora phaffii: TPHA_0M02150
Entry
TPHA_0M02150      CDS       T02235                                 
Symbol
TPHA0M02150
Name
(RefSeq) hypothetical protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPHA_0M02150 (TPHA0M02150)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0M02150 (TPHA0M02150)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TPHA_0M02150 (TPHA0M02150)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     TPHA_0M02150 (TPHA0M02150)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 11531922
NCBI-ProteinID: XP_003688223
UniProt: G8C0S4
Position
13:complement(445915..447393)
AA seq 492 aa
MQSINPQLPLFPGGNEQMFNQQQQQQAPNNQMFSPQINQARLINQQQPNQVLPAGMNLMN
MNPGANNNNINPNKNNNQNMLNSLVMKQKLQVLQQQQQQQSQNIQAQAQAQALSQAQAQQ
PLNINNNNQNMPPGMNVLQRSIPSMIMNGQQQQQQQPAELLHMNVGTPSNAHVNINNANL
NLNRADISNANSVPSNINNYRNNLLPPPNHLFIRDVWNGNLHSEFSNLRNLIQHYNRVSI
STEFAGTLARPIGNFRSKTDYHYQTMRSNVDFLNPIQIGISICDANGKKPDNGPSSWQFN
FKFSIEDEIVSADSLDLLKKSGINFENHKNNGIEVFEFAQLLMDSGLVLEKNVTWIAFHA
AYDFGFLIHLLMNDMMPNNTKDFEWKVNKYLPNFYDLNLIYKIIDDFKEQLKLSQQPQQQ
QQQPQQQNQLSLTSLAEELGIPRFPIFTTTGGNSLLTSLVFSQLSNMSMKKLPNGLEFSH
YKNLIFGILNDS
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgcaatcgataaatcctcagcttcctttatttcctggcggcaatgaacaaatgtttaac
cagcaacaacaacagcaggctccaaataatcaaatgttctcacctcagatcaatcaagcc
agattgattaatcaacagcaaccaaatcaagtgttgcccgcaggtatgaatttgatgaac
atgaaccctggggcaaataataataatattaacccaaataagaacaataaccaaaacatg
ttaaacagtttggtaatgaagcagaaattacaagttttgcagcagcagcagcagcagcaa
tcacaaaatatacaagcacaggcacaagcacaggctttatctcaagcacaagcacaacaa
cctttaaatattaacaataataaccaaaatatgccgccaggtatgaatgttttacagaga
agtattccatcgatgataatgaatggccaacaacaacaacagcagcagcctgctgaatta
ttacatatgaatgttggaactcctagcaatgcccatgttaatatcaataatgccaattta
aatttaaatagagcagacatttcaaatgccaacagcgttccttcaaacattaacaattat
agaaataatcttctacctccgccaaatcacttatttattcgtgatgtgtggaatggtaat
ttgcattccgaattctcgaatttgagaaatttaattcaacattacaaccgagtttcgatc
agtacagaatttgctggtacgttagctagaccaattggtaatttcagatctaaaactgat
taccattatcaaactatgagatcgaatgttgatttcttaaatccgattcaaattggtatt
tctatatgtgatgccaatggtaagaaaccagataacggtccttcaagttggcagtttaat
tttaagtttagcatagaggatgaaattgtcagcgcagattctcttgatttattgaagaaa
tctggaataaactttgagaaccataaaaacaatggtatcgaagtttttgaatttgcacag
ttattaatggattctggattagtcttggaaaagaacgtcacatggattgcattccatgca
gcttatgattttggatttttgatccatttattaatgaatgacatgatgccaaataatacc
aaagatttcgaatggaaggttaataaatatcttccgaatttttacgatctaaatctgata
tacaaaattattgatgatttcaaagagcaattaaaactatcacaacagccacaacaacag
caacagcagccacaacaacaaaaccaactctccttgacatccttagcagaggaattgggt
attccacgtttccctattttcaccacaacaggtggcaacagtttattgacatcattagtg
ttttcacaattaagtaatatgtccatgaagaaattaccaaacggattagagttttcacat
tataagaacctaatatttggaatcttgaacgattcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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