KEGG   Treponema pallidum subsp. pertenue Gauthier: TPEGAU_0102
Entry
TPEGAU_0102       CDS       T01750                                 
Name
(GenBank) UvrD/REP family ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
tpg  Treponema pallidum subsp. pertenue Gauthier
Pathway
tpg03420  Nucleotide excision repair
tpg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TPEGAU_0102
   03430 Mismatch repair
    TPEGAU_0102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpg03400]
    TPEGAU_0102
Enzymes [BR:tpg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TPEGAU_0102
DNA repair and recombination proteins [BR:tpg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TPEGAU_0102
   MMR (mismatch excision repair)
    Other MMR factors
     TPEGAU_0102
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 AAA_11 DEAD YgfZ_barrel ResIII
Other DBs
NCBI-ProteinID: AEZ59357
Position
complement(109751..111724)
AA seq 657 aa
MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQSRILALTFTNKA
AHEMSERIKALTGKPLRNMTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREA
AKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQHKERALWHEYQTALKLFNAVDFDDLI
VLPIQIFSEYPDILASYKSRYHYILVDEFQDTSAQQYRLMKMLATQNICVVGDDDQSIYS
WRGAHHDNILSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWSGNDSG
KPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIEDVFLQENIPY
RVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLHLVSDIANTQQ
CSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYKVRKFVEDIQY
FNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTLLARDNVQKET
EGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSIEEERRLFYVAITRAKEKL
YLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPEGKISEEEVTRAFTRIKKLFT
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgctctctacacttaatcctgagcaacgtcgagccgttaccacacttgagggaccgctt
ctcattatcgccggcgcaggctcagggaaaacgcgcgtaatcacggcgcgcatcgcgtat
atgctcgaatgcggtattctgcaatcgcgcattcttgcactgaccttcactaacaaggcc
gcacacgagatgtctgaacgtattaaagctctcacgggcaaacctttacgcaacatgacc
gtcagtacttttcacgcttttggcgttacgattttgcgagaacatatccatgttctcggc
tggaggaagaactttagcatttatgatgaaaatgataaacgtgctctcattcgcgaagca
gcaaaggaagtacatctcctgccagaagttcttgacacaaactgcgtgagcacgctcttt
tccgctattaaaatgcagcgtaagaacttaaaagagctacagcacaaggaacgtgctctt
tggcacgaatatcagactgcgttgaaattatttaatgcggtagactttgacgatttgatc
gtgctgccaatccagatcttcagtgaatatcctgatatccttgcttcatataagagtcgc
tatcattacattttagtggatgaattccaagacaccagtgcacagcagtaccgtttaatg
aaaatgctcgctacacaaaatatctgtgtagtaggggacgatgatcaatcaatttattct
tggcgtggagcacaccacgacaatattctctcttttgaaaaagacttcccctacgccaca
gaaattaccttagagcaaaattaccgttccaccggaactattttggctgccgcaaatggc
gttatcgcacacaatacacaacgcaaggaaaaggcactgtggtccggtaacgattcagga
aaacctattgaaatcttcaatcccgaaacggaacgtgatgaagcaatctttattgcaaac
acgattctcgcagaacaaatacgcgcatcctattctttcagtagttttggagtcctactc
cgcacgaatagttttatgcgcataattgaagacgtatttttgcaagaaaatattccatac
cgtgtctcaggcggcatgagcttttttcagaggaaagaaataaaggatgtgctcagttat
ctgcgggtaatttctaatcctgacgacgatgtcaacctattacgcatcattaataccccg
aggcgaggaattggaaaaaaaacactgcatctagtctccgacattgctaatacacaacaa
tgttccgtgttcaatgcactgaatcaaattatcaataaaacacatgcagtcgatttaaaa
gaatcacatcgtaccgctgtggaaaattttctccagctcattacccaggcgcgtacccat
ctactttcggggaaaaatcttgcgtacaaggtacgcaaatttgttgaagacattcagtat
tttaattacctcatccaagaattccaaaaaaacgaacatgccgcacgttttaaattcttg
caaatcgaacacttagtcgaatccatcgaacactgggaacagagttcagaacacggaagc
ttgtacgactacctaaaccgcgttacgttgctagcacgcgataacgtccaaaaagaaaca
gagggcgctgtgtcgctcatgacaattcatgcgtcgaaggggctggaatttcccgtagtg
tttatcgccggcgtggaagcgggaaccattccacacgaacgaagtatagaagaggttcac
agcatcgaggaagaacgacgccttttctacgttgcaattacccgcgcaaaagagaagttg
tacctgacacactgccgcacaaggaaacgcggcggaaaaagggaagagcgcaccgcctcc
ccctttctggacgaaattcccaaacacctggtgcgcgcccatgcaccggaaggaaaaata
agcgaggaagaggtcacgcgggccttcacacgcatcaaaaaactatttacgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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