KEGG   Treponema pallidum subsp. pallidum Chicago: TPChic_1004
Entry
TPChic_1004       CDS       T01868                                 
Symbol
recR
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
tph  Treponema pallidum subsp. pallidum Chicago
Pathway
tph03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TPChic_1004 (recR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tph03400]
    TPChic_1004 (recR)
DNA repair and recombination proteins [BR:tph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TPChic_1004 (recR)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TPChic_1004 (recR)
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_C Toprim Hairy_orange HHH_5 RecR_ZnF
Other DBs
NCBI-ProteinID: ADD73096
Position
complement(1093821..1094426)
AA seq 201 aa
MIPAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGA
FCEGRTCALCTDASRDRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQL
RIAALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEY
IDRTTLAHSLRGRRPLDCSEA
NT seq 606 nt   +upstreamnt  +downstreamnt
atgataccggcgattgaagaagtagtggagcatttatctcgtctcccgggtattggagta
aagctggcgacgcgccttgcctatcaccttttgaaacgtgaccccgctgaagcgcaggtt
cttgcgcgcgggattgcgtgtttgcatgagcgcgtatatcggtgtgtgtgctgcggtgct
ttctgtgaggggaggacctgcgcgttgtgcacggatgcgtctcgggaccgaggcatcatt
tgtgtagtggagcgtgcgcaggacgtggaaatgatggcgggtgtgggggagtatcggggt
ttattccacgtgttaggaggagtcattgcaccgcttgagggggtcggtcctgaccagctc
cgtattgcggcgttgctgaaacggttgcaagagagttcagtacgggaagttattctggcg
ttgaatcccaccgtggaaggggataccaccgccttgtatgtgcaaaaaatccttgcaaac
tttccggtaatagtaacgcgtctagcgtctggtatccccgtagggggggacttagaatat
atcgaccgaacgacattggcgcacagcctgcgtgggcgccggccacttgattgctcggag
gcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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