KEGG   Treponema primitia: TREPR_1735
Entry
TREPR_1735        CDS       T01507                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
tpi  Treponema primitia
Brite
KEGG Orthology (KO) [BR:tpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpi03009]
    TREPR_1735
Enzymes [BR:tpi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     TREPR_1735
Ribosome biogenesis [BR:tpi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TREPR_1735
SSDB
Motif
Pfam: tRNA_U5-meth_tr MTS Methyltransf_25 Methyltransf_12
Other DBs
NCBI-ProteinID: AEF85954
UniProt: F5YMT5
Position
2528199..2529446
AA seq 415 aa
MGEIFTSLVEHISSGGAGVLNFQGKRVFMDFTAPGDLAVGRIIEDKRSWARAELLELSEA
SPLRASPACPLYGTCGGCSLQHLNYKTQVAEKALILQDAFKHIGGITLPPAFDFIPSPPW
NYRNRMQLHCILQNRPQAKNHRAGTHSGLLATQFPAPLATQFPAQNRLGFMGRKSGDIIP
VDRCPVADPGIASALQEGAILPPPAKDRFTVFSFETTLLSEGTIRGKAQSRGTVTLLGKE
LRMDAGVFFQSNCGMLERLIGDLAQIAGTTDRTLPMADLYCGVGTFAAFLGEQFPRIDLV
EENPEAIVLARENIRGQDGRLFAQTGDLWAKGCTMDSSYGFMVADPPRQGLSPALRRALA
EKGPPVLAYVSCDPGTLARDCGELLAGGYRLEMLRGYDFYPQTAHIESLAVFRKG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggtgaaatctttacttctctggtcgaacatataagctcaggcggagcgggtgtcctg
aatttccagggaaaacgggtttttatggattttaccgcccccggggacctggctgtaggg
cggattatagaagacaagcgcagttgggcccgggcggaactcctggaactgtccgaggct
tcaccgctcagggccagcccggcctgccccctctacggaacctgcgggggctgctccctc
cagcacctgaactataagacccaggtcgcggaaaaggcgctcatacttcaggacgccttc
aagcacatcgggggtattaccctaccacctgctttcgactttatcccctccccgccctgg
aactaccggaaccggatgcaattgcattgtattctccaaaatcgccctcaggcaaaaaat
caccgggccgggacacattccggactacttgcaacgcagttccccgcgcctcttgcaacg
cagttccccgcgcaaaaccggttgggctttatgggccggaaaagcggcgatatcatcccg
gttgaccgctgcccggtggccgatccggggatagcttcggccttgcaggaaggcgccatc
cttccgcccccggcaaaggaccggtttaccgtcttttcatttgaaaccacccttttgagc
gaaggaactatccggggaaaggcccaaagccggggcacggtaaccctgctgggaaaggaa
ctgcgcatggacgccggggtgtttttccagagcaactgcggcatgttggaacggctcatt
ggggatctggcccaaatcgccggtacaacagaccggacccttcccatggcggacctgtac
tgcggggtgggtaccttcgcagccttcctgggggaacaattcccccgtatcgatctggtg
gaggaaaaccccgaggccatagtcctggcccgggaaaatattcgcggccaggatgggcgg
ctattcgcccaaactggtgatctctgggcaaagggctgtaccatggacagcagctacggc
ttcatggtggcggacccgccccggcagggcctgtccccggcactgcgccgggccctggcc
gaaaaaggcccaccggtactggcctacgtttcctgcgatcccggaaccctggcccgggac
tgcggggaattattagccggggggtaccggctggaaatgctgcggggctacgatttctac
ccccagactgcgcacattgaaagcctggcggtgtttaggaagggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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