KEGG   Treponema paraluiscuniculi Cuniculi A: TPCCA_0002
Entry
TPCCA_0002        CDS       T01555                                 
Symbol
dnaN
Name
(GenBank) DNA-directed DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
tpl  Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03030  DNA replication
tpl03430  Mismatch repair
tpl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPCCA_0002 (dnaN)
   03430 Mismatch repair
    TPCCA_0002 (dnaN)
   03440 Homologous recombination
    TPCCA_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpl03032]
    TPCCA_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:tpl03400]
    TPCCA_0002 (dnaN)
Enzymes [BR:tpl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TPCCA_0002 (dnaN)
DNA replication proteins [BR:tpl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TPCCA_0002 (dnaN)
DNA repair and recombination proteins [BR:tpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TPCCA_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_3 DNA_pol3_beta_2 DNA_pol3_beta
Other DBs
NCBI-ProteinID: AEH39961
UniProt: F7XRJ9
Position
1642..2757
AA seq 371 aa
MKILCEKEAFLKEINTAQEVISNKKNTSIFSNVLLAAQGALLTIRATDTKVTFETSIPVN
VLAEGTTTVFCDKLVNVVSVLPTKEIELTLCEEQLVITPPNKKISFQLRTLSHESFPCFP
QNEGGVSLAVPTSDLRNMINHTVFAVSEDSTRHFINGVHVDFQYGNIICVSTDGKRLAYI
EKKGESSPQSFSGVIVPTKILGIVNRKLTPEGSVTLCITSQHVYFFFGGYKFSSVLIEGQ
FPNYKRVIPDHQERSFCVGRVELMEALKRVSLLVEQKSHRIFITIQQGLLTLSSKAHTQE
NEIGDAQEEIACAYTGESEIIALNYLYLEEPLKVFTSKEVQVEFTDPAKALTLRAVPNTD
CFHIIMPMQTE
NT seq 1116 nt   +upstreamnt  +downstreamnt
gtgaaaattctatgcgagaaagaagcctttctgaaggaaataaacacagcacaagaggtt
atttcaaataaaaaaaacacgtctattttttcgaacgtcctattagctgctcaaggagcc
ctgcttaccatcagagcaaccgacacaaaagttacctttgaaactagcattcccgtcaat
gttctcgccgaaggcacaacgacggttttttgcgacaaacttgtgaatgttgtttctgtc
cttccaacaaaagaaatcgaattaacgttatgtgaagaacaacttgtcattacccctcca
aacaaaaagataagctttcagctcagaaccctctcacatgagagttttccatgtttccct
caaaatgaaggaggcgtctctcttgctgtgcctacctccgatcttagaaacatgattaac
cataccgtttttgcagtctcagaagacagtacgcgccattttatcaatggcgtacacgtt
gattttcagtatggaaatattatttgtgtttcaacagatggaaagcggctcgcctatata
gaaaaaaagggagaatcctctccccaatccttttcgggtgttattgtgccaactaagatc
ttaggcatagtaaaccgtaagcttacccctgaaggatcagtgacgctatgcattacgtcg
cagcacgtttacttttttttcggtggatataagttttcttctgtgcttattgaggggcaa
tttcctaattacaaaagagtaatccctgatcatcaggagcgttctttttgtgttggacgt
gtggagctaatggaggcacttaaacgagtctcgttgttggtagaacaaaaatctcacagg
atatttattaccatacagcagggtttgttgactttaagctcaaaagctcacactcaagaa
aatgaaataggtgatgctcaggaagaaatagcctgtgcttatacaggagaaagtgagatc
atagctcttaactatctataccttgaagaaccgcttaaggtttttacttcgaaggaggtt
caagtggaatttaccgatcctgcaaaagcactcacgcttcgtgctgtaccaaacacggac
tgctttcacatcattatgcctatgcaaacggagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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