KEGG   Treponema pallidum subsp. pertenue SamoaD: TPESAMD_0103
Entry
TPESAMD_0103      CDS       T01751                                 
Symbol
recQ
Name
(GenBank) ATP-dependent helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
tpm  Treponema pallidum subsp. pertenue SamoaD
Pathway
tpm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPESAMD_0103 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpm03019]
    TPESAMD_0103 (recQ)
   03400 DNA repair and recombination proteins [BR:tpm03400]
    TPESAMD_0103 (recQ)
Enzymes [BR:tpm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TPESAMD_0103 (recQ)
Messenger RNA biogenesis [BR:tpm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TPESAMD_0103 (recQ)
DNA repair and recombination proteins [BR:tpm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      TPESAMD_0103 (recQ)
SSDB
Motif
Pfam: Helicase_C DEAD RecQ_Zn_bind T4SS-DNA_transf Sgf11 Helicase_C_2
Other DBs
NCBI-ProteinID: AEZ57222
Position
111487..113418
AA seq 643 aa
MGNTSDWVEMDGLRYVYAAQGAAPMPAPTDNPACDAHMSHDVIARTAQAVFGIRALFPWQ
RLVIANILDAAHACTHTTPFAAAGSSQTDATRVTHVDDAQPEDNFVGAMQDTRFDQDGVS
RAHQVVLLPTGAGKSLCFQVPALFLEGPTLVVYPLLSLMRDQCRRMQAVGFSVILLRGGL
NAQERAYMYAQLDRCAEAYGRMRGVTPPAHQTAEFSLADSISFDASLFSDDVSTFSKVVH
VDERLAQKRTESRRGVCIIASPEILTQPALRARVRACRVAHLVIDEAHCVSEWGDSFRPD
YVRLGELVQDLAPQVVTAFTATASQTVLARIMEVLFGGRAHVLQGTVDRPNIRYTVRTVL
CKQTALTQLVARCVRPAVIFCARRVQVERVAHHLRTCLSDTQIRFYHAGLQREEKETVER
WFHTHDSAVLVTTCAWGMGVDKPNVRTVIHVDAPLTVEAYVQEVGRAGRDGMRADAFLLW
SPRDARSIETLPHAQRVRAHVLRHFAESGRCRRAVLLESLGEQNVCAGCDVCAGTARFVC
EDVEALLQFLKKNARRFTVSSLVQHLALHQKVLSVADVHALLYYALETGRVKKNIHSCGV
MSCMLHVNDSASKSYLQESKKDGENIQLPCIFRELRAFLWPSG
NT seq 1932 nt   +upstreamnt  +downstreamnt
gtgggtaatacttcagattgggtagagatggatggattgcgctatgtgtatgccgcgcag
ggtgcggcccccatgcctgctcctacggataatcctgcttgtgatgcgcacatgtcgcat
gacgtcatagcgcgtactgcccaagcagtttttggtattcgtgcgctgtttccttggcag
cgcttggtaattgctaacatactggatgcggcgcatgcgtgtacacatacaactccgttc
gctgcggcaggttcttctcaaaccgatgctacgagggtgactcatgtggatgacgcgcag
cctgaggataatttcgtcggtgccatgcaagacacacgttttgatcaggatggcgtgtca
cgcgcacatcaagtggtgctattgccgacaggtgcaggaaaatcgctgtgttttcaagta
cctgccctctttttagaggggccgacgctagtggtgtacccactgttatcgctcatgcgt
gatcagtgccgtcggatgcaggcagtgggattttcggtcatcttgttacgtggtggactg
aatgcgcaagagcgcgcgtacatgtatgcgcagttggataggtgtgctgaggcgtatggc
cggatgcgaggcgttacgcctcctgcacaccagacggcagaattttcccttgcagattcg
atctcttttgatgcgtcactcttctctgatgacgtgagtaccttctcgaaggtggtacat
gtggatgaacgtcttgctcagaaaaggacagaaagtcgaagaggtgtatgcatcatcgca
agtccagagatactcacacaacctgcgctgcgcgcacgcgtgcgtgcatgtcgcgttgcg
catttggttattgatgaagcgcactgtgtgtccgagtggggagattcgtttcgtcctgat
tacgtgcgactaggcgaattggtgcaggatcttgcgcctcaagtggtgactgcatttacg
gcgactgcaagtcaaacagtgcttgcgcgcatcatggaagtgctgtttggcggtcgtgcg
cacgtgttgcagggaacagtagatcgcccgaacattcgatacaccgtacgcacggtgctg
tgtaagcagacggcactgactcaacttgtagcgcgttgtgtgcgccctgcagttattttt
tgtgctcgtcgggtacaggtggagcgtgtagcccaccatttgcgcacgtgtctttctgac
acacagatacgtttttatcacgcagggttgcagagggaagaaaaagaaacagtggagcga
tggtttcatacccatgattctgccgttttggtaactacttgcgcgtggggaatgggagtt
gataagccgaatgtacgtacggtcattcacgtggatgcgccactgactgtggaggcgtac
gtacaggaggttggaagagcaggacgggacggaatgcgtgcagacgcatttttattgtgg
tcacctcgagatgctcgctcgatagaaacactgccgcatgcacaacgggtgcgtgcgcac
gtgttgcgccactttgctgaaagcggacgttgtcgccgcgcagttttacttgagtctttg
ggggaacagaatgtgtgtgccggatgtgatgtgtgtgcaggcactgcacgttttgtatgt
gaggatgtagaagcgctcttacagtttttgaaaaagaatgcgcgcagattcactgtatca
tcgttggtgcagcacctcgcgctacatcagaaagtgctcagtgtggcggatgtacatgcc
ttgctatattacgcgctcgaaacaggacgtgtgaaaaaaaacattcactcttgtggggtg
atgtcctgtatgttgcacgttaacgattctgcgagcaaatcgtatctgcaggaaagcaag
aaggatggcgagaacatacagttgccttgtatattccgcgagttacgcgcatttttatgg
ccgagtggttag

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