KEGG   Treponema pallidum subsp. pertenue SamoaD: TPESAMD_0903
Entry
TPESAMD_0903      CDS       T01751                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
tpm  Treponema pallidum subsp. pertenue SamoaD
Pathway
tpm00470  D-Amino acid metabolism
tpm00550  Peptidoglycan biosynthesis
tpm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tpm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    TPESAMD_0903 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TPESAMD_0903 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpm01011]
    TPESAMD_0903 (murD)
Enzymes [BR:tpm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     TPESAMD_0903 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:tpm01011]
 Precursor biosynthesis
  Amino acid ligase
   TPESAMD_0903 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N AdoHcyase_NAD
Other DBs
NCBI-ProteinID: AEZ58036
Position
986570..988168
AA seq 532 aa
MEQARALLQGKTVTIMGLGVHGGSCAAACFCAEAGARLTVTDLRNADALTPSLKRLRAYP
SIRFTLGEHRLEDFENAHVVIKNPIVKGAHNIYLSAAQRAGARIETDISLFLRLSPAPLL
AVSGSKGKSSTASALCYSLRALGFPAFLGGNSTVSPLEFVRHTTPATPVVLELSSWQLAD
LRAVDAQDHTVHHAGLLRPEIAIMTPIMADHQNWYADMESYVADKQVLYAHQGTHDTLLC
NADDGWGPRFACEAQKNGVRVFWYTAQSPETACRACTPRLMERALWRATDGTYWARFAEG
DRACMLIPPQLHVPGRVLQTQVASAALAALLFAQRHSLPPSSCPPCFCAHSHSPAYANHA
SPPDYACPSAHSPFQEHTRRLAQALESYTGIEHRLEFFYEKGGLRFYNDSASTVPEATIA
ALEAFDESVVLIVGGTDKNADYQPLAQAAAKAHALYLLAGSATARLQPLLHAAQVPFYGP
FTSLEVLLQDLRARQKSPGVIVFSPGAASFELFAHEFERGTTFKSQVRIIFE
NT seq 1599 nt   +upstreamnt  +downstreamnt
gtggagcaggcgcgcgcacttcttcaaggcaaaacggtaaccatcatgggcctcggcgtg
cacggcgggagctgcgcggcagcctgcttttgtgcagaagcgggagcgcgccttacggtt
accgacctgcgaaatgctgatgcgcttaccccttccctgaaaagacttcgtgcgtacccg
tccatccgctttacgctcggtgaacaccggctggaagattttgaaaacgcgcatgttgtc
atcaaaaatcccatcgtgaagggtgcacacaacatctacctttccgctgctcaacgcgcc
ggcgcgcgcatcgaaacggatatctcccttttcctacgcctttctcccgccccgctgcta
gcagtaagcggcagcaagggaaaatcctccactgccagcgccctgtgctacagcttgcgt
gcgctgggtttccccgcctttctaggggggaatagcacagtcagcccgctggaatttgtg
cgtcacacaacgcctgcaacaccagtggttctggaactgtcgagctggcagcttgcagac
ctacgcgcagtcgatgcacaggaccacactgtacaccacgccggtctgctgcgcccggag
attgccatcatgactcccattatggctgaccatcaaaactggtatgcggatatggaaagc
tacgtggcagacaaacaggtgctatacgcacaccagggaacgcacgatacactgctgtgt
aacgcagatgacgggtggggaccccgctttgcctgcgaagcgcagaaaaacggagtgcgc
gtcttttggtatacggcccagtcgcctgagaccgcttgccgcgcgtgcaccccgcgcctc
atggagagagctctatggagagcgacggacggaacctactgggcacgttttgcagaaggt
gaccgcgcctgcatgctcatcccaccgcagctgcacgtaccgggccgtgtcctccaaacg
caagtggcgagtgcagcgcttgcagcgctcctgttcgcgcagcggcattctctacctcct
tcctcctgccccccgtgtttttgcgcacactcccattcccccgcgtacgcgaatcacgcg
tcccccccagactacgcttgtccgtccgctcacagtcccttccaagagcacacccggcgt
cttgcacaagcgctggagtcctacacgggcatcgaacaccgactagagtttttttacgaa
aaggggggactgcgtttttataacgattctgcatccactgtacctgaggcaacaattgca
gcgctggaagcctttgatgaaagcgtggttcttatcgttggcggcactgataagaatgca
gactaccaacccttggcacaggcagcagccaaggcgcacgcattgtacttgcttgcagga
agtgctacggcacggttgcaaccacttcttcatgcagcacaggtacctttttacggaccg
tttacttcccttgaggtactcctgcaggatctccgggcgcggcagaaaagcccaggcgtg
atcgtgttctctcctggggcagcgagttttgaacttttcgcccacgagtttgagcgaggt
actacctttaaatcccaggtgcgtatcatttttgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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