KEGG   Thalassiosira pseudonana: THAPSDRAFT_27083
Entry
THAPSDRAFT_27083  CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K03250  translation initiation factor 3 subunit E
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tps03012]
    THAPSDRAFT_27083
   03051 Proteasome [BR:tps03051]
    THAPSDRAFT_27083
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tps04147]
    THAPSDRAFT_27083
Translation factors [BR:tps03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    THAPSDRAFT_27083
Proteasome [BR:tps03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    THAPSDRAFT_27083
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   THAPSDRAFT_27083
SSDB
Motif
Pfam: eIF3_N PCI
Other DBs
NCBI-GeneID: 7444646
NCBI-ProteinID: XP_002287841
JGI: 27083
UniProt: B8BUG4
Position
2:complement(1089199..1090911)
AA seq 465 aa
MTSPAPADAAADDAANYDLTSLISPYLDLHMMFPLLEYIDSLISTGSVSYSSSDVAQARL
KLLKPTHMVDYAMDIYREVHGENAEIPKDMEDQKVEVFRELEELREGQMKLDELFRNEEV
RANLVQNNQWNVKSLIAATSYGITSDTIAAYYKFAKFNFDCGDYQQGPAAKSSPAEDEKT
GNPNMYYLTSIDTTLLQVLWGKLSCEILVEDWEEASVALVAVKTAIDLFVFWNDASGKGL
ESMVELFTSEKYLQAVTTHAPHLLRYLTAAVLLCKRRAAKKAGSNSNAEGRRLLRDLVKV
MQQCEYSDPIVEFVDKLSVKFDFEAAQSQLARCETVLSSDFFLCKQTELFMEEARVFVFE
NYCRIHHKIDLTTLGEKLAMDRDRAERWIVDLIRNALLDAKIDSEEGCVVMGTGSTSVYE
QVMDKTRDLTARSGGLVVNLRGYVNDARREKIRKERKATEEAEAY
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgacatccccagcacccgccgacgcggcggccgacgacgcagccaactacgacctcacc
tccctcatctccccctacctcgacctccacatgatgttccccctccttgagtacatcgac
tctctcatctccaccggctccgtctcgtacagctcgtccgatgtggcgcaggctcgtttg
aagttgctcaagccgacgcacatggtggattacgccatggacatttatcgcgaggttcat
ggcgagaatgcggagattccgaaggatatggaggaccaaaaggtggaggtctttcgggag
ttggaagagttgagggagggacagatgaagttggatgagttgtttcgtaatgaggaagtt
cgggccaatctcgttcaaaacaaccagtggaacgtcaagtctctcatcgccgccacctcc
tacggcatcacatccgacaccatcgctgcgtactacaaattcgcaaagttcaactttgac
tgtggagattaccaacagggacctgctgccaaatcttctcctgccgaggatgaaaagact
ggaaatcccaacatgtactatctgacttctattgacactactctcctccaggtcttgtgg
ggcaagctctcttgtgagattcttgtcgaggactgggaagaggcatccgtcgccctcgtt
gcagtcaaaacggccattgatttgttcgtcttttggaacgatgcttctggcaagggattg
gagagcatggtggagttgttcacctcggaaaagtacctccaggctgtcactactcatgct
cctcatttgctgagatatctcactgcggctgtcttgctgtgcaagcgccgtgcggcaaag
aaggctggaagcaactccaacgctgagggacgtcgattgctacgtgatttggtcaaagtt
atgcaacaatgcgagtactctgatcccattgtagagttcgttgataagctctcagtgaag
tttgattttgaggctgcccaatcgcaactggcgaggtgcgagactgtcctctcgtctgac
ttcttcttgtgcaaacaaacggagttgttcatggaggaggcacgtgtctttgtgtttgag
aactactgccgaattcaccacaaaatcgacttaacaaccttgggtgaaaagcttgccatg
gatcgtgaccgtgctgaacgttggattgttgatttgatcagaaatgcactgttggatgcc
aagatcgattcagaggaaggatgtgtggtgatgggaactggaagtaccagtgtgtatgag
caggtgatggacaagacgagggatctcactgcaaggagcgggggtctggttgtgaacttg
agagggtatgtcaatgacgcgagaagggagaagatcagaaaggagaggaaggctacggaa
gaggcagaagcctactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (218)   
   KEGG ORTHOLOGY (1)   
   RefGene (213)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (228)   

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