KEGG   Thalassiosira pseudonana: THAPSDRAFT_29469
Entry
THAPSDRAFT_29469  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K03354  anaphase-promoting complex subunit 7
Organism
tps  Thalassiosira pseudonana
Pathway
tps04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    THAPSDRAFT_29469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_29469
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_29469
Ubiquitin system [BR:tps04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     THAPSDRAFT_29469
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    THAPSDRAFT_29469
SSDB
Motif
Pfam: TPR_1 TPR_19 TPR_2 TPR_16 TPR_11 ANAPC3 TPR_17 TPR_9 TPR_7 DUF627 Tcf25 Mad3_BUB1_I ChAPs
Other DBs
NCBI-GeneID: 7445913
NCBI-ProteinID: XP_002292854
JGI: 29469
UniProt: B8C9I9
Position
10:complement(625800..626657)
AA seq 236 aa
MYHLAREDHDKALAFVDKAISLNQQHAFAHYLRGSILHSSQRYDHAVVSFFRANDLQKDL
PSYEGLVESYLAANKFKEAICTAKEAISRAPRDARAITLVGLALAQAPVLQQKGEGKERA
KRALKKAMALDPGALKPLFALVDLHAAEGDFEVCYKLLREGIEEHLDLLYAKTAEIYTAD
EKYVEALECFHTAISMNPQNGLAVQGLERLEKILKGIDPDDEEELDEAGDMDDGGD
NT seq 708 nt   +upstreamnt  +downstreamnt
atgtaccatttggcacgtgaggatcatgataaggcgttggcgtttgtggacaaggctatt
tcgttgaatcagcaacatgcatttgctcattacttgagaggatcgatccttcattcttct
cagaggtatgatcatgcggtggtatcgttctttcgtgccaatgatttgcaaaaggattta
ccgtcatatgagggtctcgtggagtcgtatttggcagcgaataagttcaaggaagccatc
tgtacggcgaaggaggcgatatcacgtgctcctagggatgcacgtgcgattactttggtt
ggattggcgctcgcacaggcacctgttctgcaacagaaaggagaggggaaggagagggcg
aaaagggctttgaagaaggcaatggcgttggatccaggtgcattgaaacctttgtttgca
ctagttgatttgcatgctgcagagggcgactttgaggtatgctacaagttgctacgggaa
gggattgaagagcacttggacctgctttacgcaaagacggctgaaatctatactgctgac
gaaaaatacgttgaagcattggagtgttttcacactgcgatatcgatgaaccctcaaaat
ggattggcagtgcagggattggaacgattagaaaagattctcaaagggattgatcctgat
gacgaagaggaattggacgaggcgggagacatggatgatggaggagat

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (73)   

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