KEGG   Thalassiosira pseudonana: THAPSDRAFT_33252
Entry
THAPSDRAFT_33252  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_33252
Enzymes [BR:tps01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     THAPSDRAFT_33252
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  90S particles
   Helicases
    THAPSDRAFT_33252
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA
Other DBs
NCBI-GeneID: 7441730
NCBI-ProteinID: XP_002288183
JGI: 33252
UniProt: B8BWZ3
Position
3:263040..264494
AA seq 409 aa
QQHQTSKKNNKAIHHFKSLHQTILHNLESGKWTEPTPIQMQAIPSLMERRDVMGCAPTGS
GKTGAFQQQPSPTDGTSSSSPNLQGHVRTILLAPSRELSSQLHREILRLSVNTPNKFHCA
LLSKSNAGLAIQNQLGGKSGLDCLISTPLRLVECIERGMRLNGVRLIVLDEADRQNAQSG
SSQSRTFLQQIDSILSHLPSTATRALFSATLGPSVRHLSESILRSPIDITTGIHAGIGGN
SAAGGASEHIQQELKFVGREEGKLLAIRQLVAEGITPPVLIFLQSKERAQALFGELLYDG
IRVDVIHAGRSASAREASVAKFRKGETWVLICTDLVARGVDFKAVNLVINYDLPMEGVTY
VHRIGRTGRAGRAGRAITFFTEADFENLRTIANVMKLSGCEVPEWMLTL
NT seq 1227 nt   +upstreamnt  +downstreamnt
caacaacaccaaacatccaaaaagaacaataaagcaatccaccacttcaaatccctccat
caaacaattctccataacctagaatctggcaaatggaccgaaccaacccccattcaaatg
caggctattccatccttaatggaacgacgtgatgtcatggggtgtgctcccacggggagt
ggaaagacgggtgcctttcaacaacaaccatcacccactgacggtacatcgtcatcatcc
cccaacctccaaggacacgtccgcaccatcctcctagccccctcacgcgaactttcctcc
caactccaccgcgaaatcctccgtctttctgtaaacacacccaacaaattccactgtgca
ctactctccaaatccaatgccggactagcaattcagaatcaactcggtggtaagagtggg
ctggactgtttgatctcgactccgttgaggttggtggagtgtattgagaggggtatgagg
ttgaatggggttaggttgattgtgttggatgaggcggataggcaaaacgctcaatctggc
tcctctcaatcacgaacattcctacaacaaattgattccatcctatcccatcttccatcc
acggcaactcgtgccctcttctcagccacacttggtccatccgtgcgtcacttatccgaa
tccatcctccgatctcccattgatataaccacggggatccacgctggtattggtggcaac
tcagctgccggtggagctagtgagcacatccaacaagagttgaagtttgttggtcgtgag
gagggaaagctattggcgattcgtcaattggtcgccgagggtatcactccaccggtactc
atctttttgcagagtaaggaacgagctcaggcattgtttggagagttgttgtacgatggg
atacgagtggatgttattcatgctggacgatcggcgagtgctcgcgaagccagtgttgca
aagtttcgcaagggagagacgtgggtattgatttgtactgatttggtagctcgtggtgtg
gatttcaaagctgtcaatctggtcattaactatgatttgccgatggagggagtgacgtac
gttcatcgtattggaagaacggggagggctggaagggcgggacgcgcgataaccttcttt
accgaggcggattttgagaacttgaggacaattgcaaatgtaatgaagttgagtgggtgt
gaggtgcctgaatggatgttgacgttg

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system