KEGG   Thalassiosira pseudonana: THAPSDRAFT_34176
Entry
THAPSDRAFT_34176  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14850  ribosomal RNA-processing protein 8 [EC:2.1.1.287]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_34176
Enzymes [BR:tps01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.287  25S rRNA (adenine645-N1)-methyltransferase
     THAPSDRAFT_34176
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    THAPSDRAFT_34176
SSDB
Motif
Pfam: Methyltransf_8 Methyltransf_11 Methyltransf_25 DUF6461 Methyltransf_32
Other DBs
NCBI-GeneID: 7447286
NCBI-ProteinID: XP_002290081
JGI: 34176
UniProt: B8C1V8
Position
5:298404..299519
AA seq 277 aa
MSTVNTTTKNNDKNKPSSTNQRQQPQLPTSPSPIKTPLPSQMSTLQKSFLARLTSSRFRE
LNEELYTQSSHHSFEQFTSQPELFEQYHVGFRKQVKEWPVNPVDVICRKIVSGKKQVVVA
DFGCGDAKLAERLFNSWCPFKVHSFDLVSGGNPLVTPADISNVNLPNESVDVGVYCLALM
GTNVADFVREGWRVLKFGGALRVAEVRSRFETASAGEETRDDGDEFISLMERCGFQCTHM
DQSNKMFLFMDFVKADGSKGLSDKERFTAKPCIYKRR
NT seq 834 nt   +upstreamnt  +downstreamnt
atgtcgacagtcaacaccaccaccaaaaacaacgacaagaacaaaccatcatctactaat
caacgtcaacaaccccaactccccacctctccatccccaatcaaaacacccctcccttct
caaatgtcaacccttcaaaaatcattcctcgctcgtctaacctcctctcgctttcgcgaa
ttgaacgaagaactatacacccaatcatctcaccattcctttgaacaattcacttcgcaa
ccagagttgtttgaacaatatcacgttggatttaggaagcaggtgaaggagtggcctgtg
aatcctgtggatgttatttgtaggaagattgtgagtggtaagaaacaagttgttgtggcc
gactttggatgtggagatgccaagttggctgagagactgttcaactcgtggtgtccgttc
aaggtacattcgtttgatctcgtatcgggaggaaatccactcgttacacctgcagatata
tccaacgtcaatctaccaaatgaatccgtcgacgttggtgtctactgccttgcgttgatg
ggaaccaatgttgcagactttgtacgtgaagggtggagagtactcaagtttggaggagca
ctgagagtagctgaagtaagatctcgtttcgagactgcttctgctggtgaagagactaga
gatgacggagacgagttcatctcactcatggaacgatgcggatttcaatgtacgcatatg
gatcaatccaataagatgtttctctttatggactttgtgaaggcagatggatcgaaggga
ctttcggataaggagcggtttactgccaagccgtgcatttacaagaggagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (62)   

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