KEGG   Turneriella parva: Turpa_0033
Entry
Turpa_0033        CDS       T02157                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
tpx  Turneriella parva
Pathway
tpx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Turpa_0033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpx03400]
    Turpa_0033
Enzymes [BR:tpx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Turpa_0033
DNA repair and recombination proteins [BR:tpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Turpa_0033
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AFM10696
UniProt: I4B089
Position
3709..4521
AA seq 270 aa
MIFGSCAILFATGMRIASFNVNGIRAIEKKGELVKLLAAEKPDIVFLQEIKAKPDQLSDA
LLKPDGYEAHYHSAEKPGYSGTGVLVRSGLFAKMQVLRGMPDWNDHEGRVLGVEAGDLVI
FGNYFPNGGKSDAAWREKLVFYDHFHQYIAALRKKKKRVLFTGDLNVAHNPIDLARPKEN
EKHVGFLPEERAWVDRLVADNWVDVFRSRYPETVSYTWWQMQSRARERNIGWRIDYFIVD
KPLYPKVREIRHLNDHQGSDHCPIVLDIDL
NT seq 813 nt   +upstreamnt  +downstreamnt
atgattttcggttcatgcgcgattctgtttgctacgggcatgcgcatcgcctcgtttaac
gtcaacggcattcgggccatagagaaaaaaggtgagctggtgaagcttttggcagccgaa
aagcccgacattgttttcttgcaggagatcaaagccaaacccgaccagctgagtgatgcg
ttgctcaaacccgatggttacgaggctcattaccatagcgccgagaaacccggctattcg
ggaaccggtgtgctcgtgcgctcagggcttttcgctaaaatgcaggttctgcgcggcatg
cccgactggaacgaccacgaaggccgtgtgctcggggtcgaggccggcgacctcgtcata
ttcggaaattatttcccgaacggaggcaaatcagacgcagcctggcgcgagaagctcgtt
ttctacgatcattttcatcagtatatcgccgccctgcgcaagaaaaagaaacgcgtgctc
ttcaccggcgacctcaatgtcgcccacaaccctatcgacctcgcgcggccgaaagaaaac
gaaaagcatgtcggcttcttacccgaagagcgcgcgtgggtagaccggctggtcgccgat
aactgggtcgacgttttcagaagccgctaccccgaaacggtcagctatacctggtggcaa
atgcagtcgcgcgcccgcgaacgcaatatcggttggaggatcgattactttattgtcgac
aaaccgctatacccaaaggtgcgcgagatacgccacctcaacgaccaccaagggtcagac
cattgccctatagtgctggatatcgatttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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