ID C8X9G4_NAKMY Unreviewed; 360 AA.
AC C8X9G4;
DT 03-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 03-NOV-2009, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=DNA primase small subunit {ECO:0000313|EMBL:ACV77232.1};
GN OrderedLocusNames=Namu_0821 {ECO:0000313|EMBL:ACV77232.1};
OS Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / CIP 104796 / JCM
OS 9543 / NBRC 105858 / Y-104) (Microsphaera multipartita).
OC Bacteria; Actinomycetota; Actinomycetes; Nakamurellales; Nakamurellaceae;
OC Nakamurella.
OX NCBI_TaxID=479431 {ECO:0000313|EMBL:ACV77232.1, ECO:0000313|Proteomes:UP000002218};
RN [1] {ECO:0000313|Proteomes:UP000002218}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700099 / DSM 44233 / CIP 104796 / JCM 9543 / NBRC 105858 /
RC Y-104 {ECO:0000313|Proteomes:UP000002218};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Ovchinnikova G., Sims D., Meincke L., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Nakamurella multipartita DSM 44233.";
RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACV77232.1, ECO:0000313|Proteomes:UP000002218}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700099 / DSM 44233 / CIP 104796 / JCM 9543 / NBRC 105858 /
RC Y-104 {ECO:0000313|Proteomes:UP000002218};
RX PubMed=21304699;
RA Tice H., Mayilraj S., Sims D., Lapidus A., Nolan M., Lucas S.,
RA Glavina Del Rio T., Copeland A., Cheng J.F., Meincke L., Bruce D.,
RA Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Ovchinnikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P.,
RA Chen F.;
RT "Complete genome sequence of Nakamurella multipartita type strain (Y-
RT 104).";
RL Stand. Genomic Sci. 2:168-175(2010).
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DR EMBL; CP001737; ACV77232.1; -; Genomic_DNA.
DR RefSeq; WP_015746148.1; NC_013235.1.
DR AlphaFoldDB; C8X9G4; -.
DR STRING; 479431.Namu_0821; -.
DR KEGG; nml:Namu_0821; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_0_11; -.
DR InParanoid; C8X9G4; -.
DR OrthoDB; 4296267at2; -.
DR Proteomes; UP000002218; Chromosome.
DR CDD; cd04865; LigD_Pol_like_2; 1.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR PANTHER; PTHR42705:SF3; -; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002218}.
FT DOMAIN 37..300
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
FT REGION 325..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 343..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 360 AA; 40659 MW; 643B3ED299320436 CRC64;
MGRSASATVS VGERDVRVSS PDRVVYEATE RTPAISKLQV CEYFAAVGEV MLRSIGQRPT
AMERWPSGWR EGMRLATGPQ DRDADGFYQK RLPKGAPDYI ETVTITFPSR RTADELCPTE
PAALVWAAQM GALTFHPWPV RRPDVDHPDE LRIDLDPQPG TSFADAKRVA AVARDLLAEL
GLRGYPKTSG NRGVHIYVRI APRWTFDEVR HAAIGLGREL ERRDGGVTTA WWKEERGTRL
FLDYNQNLRD RTIASAWSLR ARPGAPVSTP VTWERLAEID DPREFNLTTI PQYLTDGDPW
ADMDDQAYSL DPLLELWETL PGGELNWPPD YPKQQGEPPR VQPSKKVAEH WDEHGNRIEP
//
