ID C9ZET8_STRSW Unreviewed; 329 AA.
AC C9ZET8;
DT 24-NOV-2009, integrated into UniProtKB/TrEMBL.
DT 24-NOV-2009, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=DNA ligase D polymerase domain-containing protein {ECO:0000259|Pfam:PF21686};
GN OrderedLocusNames=SCAB_17401 {ECO:0000313|EMBL:CBG68871.1};
OS Streptomyces scabiei (strain 87.22).
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=680198 {ECO:0000313|EMBL:CBG68871.1, ECO:0000313|Proteomes:UP000001444};
RN [1] {ECO:0000313|EMBL:CBG68871.1, ECO:0000313|Proteomes:UP000001444}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=87.22 {ECO:0000313|EMBL:CBG68871.1,
RC ECO:0000313|Proteomes:UP000001444};
RX PubMed=20064060; DOI=10.1094/MPMI-23-2-0161;
RA Bignell D.R., Seipke R.F., Huguet-Tapia J.C., Chambers A.H., Parry R.J.,
RA Loria R.;
RT "Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic
RT cluster that contributes to plant-microbe interactions.";
RL Mol. Plant Microbe Interact. 23:161-175(2010).
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DR EMBL; FN554889; CBG68871.1; -; Genomic_DNA.
DR RefSeq; WP_012999596.1; NC_013929.1.
DR AlphaFoldDB; C9ZET8; -.
DR STRING; 680198.SCAB_17401; -.
DR GeneID; 24313123; -.
DR KEGG; scb:SCAB_17401; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_1_11; -.
DR Proteomes; UP000001444; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; MULTIFUNCTIONAL NON-HOMOLOGOUS END JOINING DNA REPAIR PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001444}.
FT DOMAIN 57..307
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..24
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..54
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 329 AA; 36042 MW; 64A3AAD7F1BBCB1D CRC64;
MANTHRMRVG RRTVEIHRPD KVLFPGSGDS DGDGNRGDGD GDRGHGNRGD GGGKEYTKAD
LVAYHRAVAP FMLPHLRGRP LMLERHPDGI DGPMFMQKNT PGHYPDWIER VEVTKEGGTV
VHPVCEDAAT LVYLADQACL TLHRWLSRTG DVHRPDRLVV DLDPAVDDFA TVRDAAVLVR
ELLDELRLPS VPMTTGSRGV HVVVPLNGRA DFDEVRAFAG EIAGTLVRAH PGRLTTEARK
KDRGDRLYLD IQRNAYAQTA VAPYTVRALP GAPVAAPLTW EQLADPAVDA RRWTLADALD
QARTDPWAGA MSRGRALGPA RRRLAALHG
//
