KEGG T03454: JO41

Treponema sp. OMZ 838: JO41_04500

Entry

JO41_04500        CDS       T03454

Name

(GenBank) phenylalanyl-tRNA synthetase subunit beta

K01890

phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]

Organism

trm Treponema sp. OMZ 838

Pathway

trm00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:trm00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    JO41_04500
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:trm01007]
    JO41_04500
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:trm03016]
    JO41_04500
Enzymes [BR:trm01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     JO41_04500
Amino acid related enzymes [BR:trm01007]
Aminoacyl-tRNA synthetase
  Class II (U)
   JO41_04500
Transfer RNA biogenesis [BR:trm03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    JO41_04500
Prokaryotic type
    JO41_04500

SSDB

Motif

Pfam:

tRNA_synthFbeta B5 PhetRS_B1 tRNA-synt_2d

Other DBs

NCBI-ProteinID:

AIW89161

Position

complement(962214..963962)

AA seq 582 aa
MPKIDVNEQLFFNLLGKKYDYSPEFEHLLSSAKAELDEAPSAAAPQDERIIKIELNDTNR
PDLWSTAGLARLLRMHTGGASNKARYQAFLSTLSERKDSGKRTVTVDPELQHIRPFMTAF
VISGKPIDDAMLKDIIQTQEKLCWNFGRKRRSVSMGVYRSELINWPVQYRAVDPHTTSFT
PLGFDTEMTCERIITEHPKGKEYSWILKDMKKVPLLSDAKGGVLSMAPIINSAEIGAVQP
GDADLLVELTGTDMPSLLLATNIVACDFSDAGYTILPVSVEYPYDTGFGKTITTPLYFQE
PTKTTVHAVNKLLGTELPAQDIVEALERMDNTVTVEGDCLTLMPPAYRNDFLHEVDIIED
VMMGKTVEFFEPETPREFTIGRLSPVTQLSRKIKTLMVGFGYQEMIFNYLGSKKDYIDRM
NIDGASVIEIANPMSENYQFVRPSIIPSLLSAETVSGNAVYPHRIFETGKIAYLAPEENT
GTRTRQSLGFLTVNQDANFNEAASLVAGLLYYLQMDYNVCETHDPRFIEGRQAGVLCDGK
QIGIFGELHPQVLENWSVTVPAFAGELDIESILIFTLPNADR

NT seq 1749 nt +upstreamnt +downstreamnt
atgccaaagattgatgtaaatgaacagctttttttcaacttgttaggaaaaaaatacgat
tattcccccgaatttgaacatttattaagctctgcaaaagcggagctggacgaagcgcct
tccgcagcggcgcctcaagatgaacgcattataaaaattgaattaaacgatacaaaccgc
cccgacctgtggtcaacagcggggcttgcgcgccttttgcgtatgcacacgggaggagct
tcaaacaaagctcggtatcaagcatttttatcgacattgagtgagcggaaggattccgga
aaacggacagtaaccgtagatcccgaattacagcatatccgcccctttatgacggcattt
gtcatttcgggcaagcccatcgacgatgctatgttgaaagatattattcaaacacaggaa
aagctgtgctggaacttcggccggaaacgccgttcggtgtcgatgggggtgtaccgcagc
gagctgatcaactggccggtacagtaccgtgctgttgacccgcacacaacctcgtttacg
ccgctcggcttcgacaccgaaatgacgtgtgagcgcattatcaccgaacacccgaaaggc
aaggaatacagctggatactcaaggatatgaagaaggtgccgctcttatcggatgcaaag
ggcggcgtgctttcaatggcgccgattatcaatagcgcggagatcggtgcggtacagccg
ggggatgccgacctgttggttgaactgaccggtaccgatatgccctctctgctgcttgca
accaacatcgttgcctgcgatttttctgatgcgggatacacgattttaccggtcagcgta
gaatatccgtatgacacgggcttcggtaagacgattaccacgccgctttacttccaagag
ccgacaaagacgacggttcatgccgtcaataaactcctcggaacggagcttccggcgcag
gacattgtggaagcgttggagcgtatggacaataccgttaccgtcgagggggattgtctg
acgctgatgccgcctgcataccggaacgactttttacacgaagtggatattatcgaagac
gtgatgatgggtaaaacggttgagttctttgaaccggaaacgccgcgggaatttaccatc
gggcggctctctccggttacccagctcagcagaaagattaaaactttgatggtcggtttc
ggttatcaagagatgatttttaattatctcggttcaaagaaagactacatcgaccgcatg
aatatagacggagcgtcggtaattgaaattgcaaaccccatgtcggaaaactatcagttt
gtccgcccgtccatcattccgtcgctcttatccgcagaaacggtttcaggcaatgcggtc
tatccgcaccgtatctttgaaacggggaaaatcgcgtaccttgctcccgaagaaaatacc
ggtacgcgcacccgccaaagtctcggcttcttgactgtaaaccaagatgctaactttaat
gaagctgccagccttgtcgccggcctactgtactatctgcaaatggactacaacgtatgc
gagacacacgacccgcgctttatcgaagggcggcaagcgggtgttctgtgcgatgggaaa
cagatcggtattttcggtgaactgcacccgcaagtgttggaaaactggtctgttaccgtt
ccggcatttgcaggcgaactcgatatcgaaagcatccttatttttacgcttccgaacgct
gaccgataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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