KEGG   Thermotoga sp. RQ2: TRQ2_0570
Entry
TRQ2_0570         CDS       T00706                                 
Name
(GenBank) apurinic endonuclease Apn1
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
trq  Thermotoga sp. RQ2
Pathway
trq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:trq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TRQ2_0570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:trq03400]
    TRQ2_0570
Enzymes [BR:trq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     TRQ2_0570
DNA repair and recombination proteins [BR:trq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TRQ2_0570
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM UvdE
Other DBs
NCBI-ProteinID: ACB08924
UniProt: B1L9C6
Position
complement(577244..578107)
AA seq 287 aa
MIKIGAHMPISKGFDRVPQDTVNIGGNSFQIFPHNARSWGAKLPSDEVATKFKREMKKNG
IDWENAFCHSGYLINLASPKEDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEE
GIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVDQKDRVAVTYDTC
HGFDSGYDITKKEGVEALLNEIETLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIGE
EGFAVFFSFKEIQEVPWILETPGGNEEHAEDIKKVFEIIEKFGIEVD
NT seq 864 nt   +upstreamnt  +downstreamnt
atgataaaaataggagctcacatgcccatctcgaaaggatttgacagggtaccacaagac
acagtgaacattggggggaactccttccagatcttcccgcacaacgcccggtcctggggt
gcaaaactcccttctgacgaggtcgccacgaaattcaaaagggaaatgaaaaaaaacggt
atcgactgggaaaatgcgttctgtcacagtggatacctcataaaccttgccagtccaaag
gaggacatctggcagaaatccgttgaacttttgaaaaaagaagtggaaatttgcagaaag
ctgggtataaggtatctgaacattcaccccggaagccatctcgggacaggagaggaagag
ggaatagacagaatagtaagaggactgaacgaagtgctgaacaacaccgaaggtgtggta
attctccttgagaacgtttcacaaaaaggaggaaatatcggatacaaattggaacagcta
aagaagatcagagatctcgtcgatcaaaaagaccgtgtggctgtcacctacgatacgtgt
cacgggttcgactctggatacgacatcacaaaaaaggagggtgtcgaagccttgctaaac
gaaatagaaaccctgtttggcctggaaagactcaagatgatacacctgaacgattctaaa
taccccctcggagcggcaaaagacagacacgaaagaataggaagcggattcataggtgaa
gaaggttttgccgtgtttttctccttcaaagagatccaggaagttccgtggatcctggaa
acccccggtggaaacgaagagcacgcggaggatataaagaaagtgtttgagatcatagaa
aaattcggtatagaggtcgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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