KEGG   Terriglobus roseus: Terro_2682
Entry
Terro_2682        CDS       T02140                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
trs  Terriglobus roseus
Pathway
trs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:trs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Terro_2682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trs03021]
    Terro_2682
   03019 Messenger RNA biogenesis [BR:trs03019]
    Terro_2682
Transcription machinery [BR:trs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Terro_2682
Messenger RNA biogenesis [BR:trs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Terro_2682
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 ATPase_2 NACHT AAA_25 OB_RNB AAA AAA_16 Spore_III_AA
Other DBs
NCBI-ProteinID: AFL88919
UniProt: I3ZH61
Position
complement(3220714..3221964)
AA seq 416 aa
MTISELKEKSIAELGKLARGLEIQGTSALRKQDLIFKILQAQSEKEGHIFAEGVLEILPD
GYGFLRSPDYNYLPGPDDIYVSPSQIRKFDLKTGDTISGNVRPPHEGEKYFALVKIEAIN
FESPEETRNKILFDNLTPLYAEERVKMETVRDNISGRVMDLLTPVGKGQRGLIVAPPRTG
KTVLLQSIANSITTNHPEVVLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIVPPSGKVLSGGVDSNALQRPKRFFGA
ARNIEEGGSLTIMATALVDTGSRMDEVIFEEFKGTGNMEVILDRKLVDKRVFPAIDIQRS
GTRKEELLIPKEDLQRTWILRKVLNPLSPVEAMELLTDKLSKTRNNQEFLHNMSSL
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgaccatctcagaacttaaagaaaagagcattgccgaactcggaaagctcgcacgcggc
cttgagatccaaggcacaagcgccctgcgtaagcaggacctgatcttcaagatccttcag
gcccagagcgaaaaagagggccacatcttcgcggaaggtgtccttgagatcctgcccgac
gggtacggcttccttcgctcgcccgactataactacctgcccggtccggatgatatttac
gtttcgccttcgcagatccgcaagttcgacctgaagaccggcgacacgatcagcggcaac
gtgcgcccgccgcacgagggtgagaagtacttcgcgctggtcaagatcgaagcgatcaac
tttgaatcgcccgaagagacgcgcaacaagattctgttcgacaacctaacgccgctgtac
gccgaagagcgcgtgaagatggagacggtccgcgacaacatctccggccgcgtgatggac
ctgttgacgcccgtgggcaagggccagcgtggcctgatcgttgcaccgccgcgtaccggt
aagacggttctgctgcagtcgattgcgaactcgatcacgacgaaccatcctgaggttgtg
ctgatcgtcctgctgatcgatgagcgtccggaagaagtcacggacatgcagcgctcggta
aagggcgaggtcatctcctcgaccttcgacgagccggcagcacgtcacgtacaggtggcc
gagatggtcatcgaaaaggccaagcgcctggtcgagcacaagcgcgatgttgtgatcctg
ctggattcgatcacccgtttggcacgtgcctacaacacgatcgtgccgccttcgggcaag
gtgctctccggcggtgtggactcgaacgcgctacagcgccccaagcgcttcttcggcgcg
gcccgcaacattgaagagggcggttcgctcacgatcatggcgacggctcttgtcgatacc
ggatcgcgtatggacgaagtcatcttcgaagagttcaagggtacgggcaacatggaagtc
atcctggaccgcaagctggtcgacaagcgcgtcttcccggcgatcgacatccagcgcagc
ggtacgcgtaaggaagagttgctgatcccgaaggaagacctgcagcgtacgtggattctg
cgcaaggtgttgaatccgctgtcgccggtcgaggctatggaactgttgacggacaagctg
agcaagacccgcaacaaccaggagttcctgcacaacatgagttcgctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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