KEGG   Takifugu rubripes (torafugu): 101067857
Entry
101067857         CDS       T02386                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
  KO
K13182  ATP-dependent RNA helicase DDX39 [EC:5.6.2.7]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tru03041]
    101067857
Enzymes [BR:tru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101067857
Spliceosome [BR:tru03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101067857
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 101067857
NCBI-ProteinID: XP_003972140
Ensembl: ENSTRUG00000022930
Position
17:4249754..4253764
AA seq 427 aa
MAETDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLTIKKDEEVLKKNCPHIIVGTPGRIRALIL
QKSLSLKNIKHFVLDECDKMLEQLDMRGDVQEIFRMTPHEKQVMMFSATLSKEVRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKTVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcagaaaccgacgtcgacaatgagcttctggattatgaagaagatgaggagccccag
ggagcaccagagagtgggaccccagccaacaagaaggaggttaaagggtcctacgtttcc
attcacagttctgggttcagagactttctcctgaaaccagagttgctccgggccattgtt
gactgcggttttgagcacccttcagaagtgcaacatgagtgtattccccaagctatactg
ggcatggacatcctttgccaggccaagtcgggtatggggaagacggcagtgtttgtgctg
gcaaccctgcagcagattgaaccagtggatggtcaggtctctgtccttgtaatgtgccac
actcgagagctggccttccagattagcaaagagtatgagcgtttctccaagtacatgccc
actgtcaaggtgtctgtgttctttggtggcctgaccatcaagaaggatgaggaggtcctg
aaaaagaactgccctcacattattgtcggaactcccgggcgtattcgtgctcttatcctc
cagaagagcctcagcttgaagaacatcaaacactttgttcttgatgagtgcgataagatg
ctggagcaacttgacatgcgaggagacgtccaggaaattttccgaatgacaccccacgag
aagcaggtgatgatgttcagtgcaactctaagcaaggaagtccgtccggtctgccgcaag
ttcatgcaagaccccatggaggtgtttgttgatgatgaaaccaagctaactctacatggg
ctgcagcagtattactgcaagttgaaggacagcgagaaaaaccgaaagctttttgacctg
cttgatgttcttgagttcaatcaggtggtgatctttgtgaaaacagtgcagcgttgtgtc
gctctgtcccagctgctggtggagcagaacttccctgccattgcaattcatagaggcatg
gcacaggaggagaggttatcccggtaccagcagtttaaggacttccagcggcggatcctt
gtggccaccaatctgtttggtcgaggaatggacatcgagcgtgtcaatattgtgttcaac
tacgacatgccagaggattctgacacataccttcacagagtggcccgtgctggaagattc
gggaccaaaggcttggccatcacctttgtttccgatgagaacgacgcaaagatcttaaat
gatgttcaggaccgcttcgaagtcaacgtcgcggagctgccagaggagattgatatctcc
tcttacattgaacagtccagatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (71)   

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