KEGG   Takifugu rubripes (torafugu): 101068933
Entry
101068933         CDS       T02386                                 
Symbol
cxcl12
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru04060  Cytokine-cytokine receptor interaction
tru04672  Intestinal immune network for IgA production
tru04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:tru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101068933 (cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101068933 (cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    101068933 (cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:tru04052]
    101068933 (cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:tru00536]
    101068933 (cxcl12)
Cytokines and neuropeptides [BR:tru04052]
 Cytokines
  Chemokines
   101068933 (cxcl12)
Glycosaminoglycan binding proteins [BR:tru00536]
 Heparan sulfate / Heparin
  Chemokines
   101068933 (cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 101068933
NCBI-ProteinID: XP_003971985
Ensembl: ENSTRUG00000006259
UniProt: A0A674NL48
Position
17:3406436..3412634
AA seq 101 aa
MDVKLLPLMVLLAVSTRAPTSSAKPISLVERCWCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQQYLKNAINKVKKNRRRNKKN
NT seq 306 nt   +upstreamnt  +downstreamnt
atggacgtcaaactgctgccactgatggtcctgctggccgtgtccacgcgcgcccccacc
tccagcgcgaagccaattagcctggtggagcggtgctggtgccggtccaccctcaacacc
gtccctcagcgctccatcaaggagctcaagttcctccacacacccaactgccccttccag
gtcattgccaagctgaagaacaacagggaggtgtgcatcaaccccgagaccaagtggctg
cagcagtacctaaagaacgccattaacaaggtgaagaaaaacaggagacgtaacaagaaa
aattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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