KEGG   Takifugu rubripes (torafugu): 101079470
Entry
101079470         CDS       T02386                                 
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X2
  KO
K11835  ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tru01002]
    101079470 (usp4)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tru04121]
    101079470 (usp4)
Enzymes [BR:tru01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101079470 (usp4)
Peptidases and inhibitors [BR:tru01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101079470 (usp4)
Ubiquitin system [BR:tru04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101079470 (usp4)
SSDB
Motif
Pfam: UCH Ubiquitin_3 DUSP UCH_1 USP7_C2 USP7_ICP0_bdg Choline_bind_1
Other DBs
NCBI-GeneID: 101079470
NCBI-ProteinID: XP_003973214
Ensembl: ENSTRUG00000005043
Position
19:8092467..8100569
AA seq 1001 aa
MMAEGGGPESAGAADSDSEPVAGQMPTPSTESQKQTIGSLLKTALRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERNLYPGPIDNSGLFSDQDTQALKEHLIDELDYVLVPTEAWNK
LISWYSCLDGQRPIVRKVIEHGMFVKHCKVEVYLLELNLCENNNMDIAVTRYFSKADTID
TIEKEMRTLFKIPAEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFHGQVLVIEQKNEDGT
WPRQASHSKSSAASSRNFTTSPKLSSNSASISSTVTNGDNCCSPGYTLNNSSSSGSRLGE
YSSYSSSYSYRESQSHPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRE
NPLGMRGEIAEAYADLVKQMWLSRSSYVAPRSFKTQVGRFAPQFSGYQQQDSQELLAFLL
DGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCP
ECSKVSVTFDPFCYLTLPLPMKKDRTLEVFLVRSDPQSRPTQYRVVVPKLGTVTDLCCAL
TKLCGVAPENMMVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDGERMNLPVYFR
ERHSKHIGSSTSTVLFGQPLLITVPKHNLIADVLYDKILERIGRYVKHTQSPNSDSRASA
SASFASSSQAAECSTSLGASGSSLSDGASCCAGSSNGSNHTGACSETNGLYDGEEEAMDH
QVSPEPENGHSEEEEASELENGSKADAIKPCSPPAKLFTFSVVNSYGTANISSLPCDGNV
LQLNPHSTVAIDWDTESKKLHYDEQEAEAYEKHESMLQPQKKKATVALKECIELFTTMET
LGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLN
MSEFVCDPKASPYIYDLIAVSNHYGGMGGGHYTAYGKNKADGKWYYFDDSSVSSASEDQI
VTKAAYVLFYQRRDEESPSKPQPSASLGGAPDAADDHMDTN
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgatggccgagggaggcggacccgagtcggctggcgcggcagactccgactcggagccg
gttgctggtcaaatgccaacaccttcaaccgaaagccaaaaacagacaatcgggtctctt
ttgaaaacggctctaagaaagggggacgaatggtatctgatcgacagccggtggttcaaa
caatggaagaagtatgtgggtttcgacagctgggacatgtataacgtcggggagcggaac
ctttatccaggaccaattgataactccgggctgttctcagatcaagatactcaggccctg
aaagagcaccttattgacgagctggactatgtccttgtgccgactgaggcgtggaataaa
ctcatcagctggtacagctgcctggatggccagagacccattgtcaggaaggtcatcgaa
cacggcatgtttgtcaagcactgcaaggtggaagtttacctgctggagctcaacctgtgc
gagaataacaacatggacatcgcggtcacgcgttatttcagtaaagccgataccatcgat
acaatagagaaggagatgaggacgctgtttaagatcccagcagagaaggagacacgcctc
tggaacaaatatatgagcaacacctacgagcagctgaataagccagacagcactgtgcag
gatgctggtctcttccatgggcaggttcttgtgattgagcagaagaatgaggacggcact
tggccaaggcaggcctcccattccaagtccagcgccgcctcgtccaggaacttcactacc
tccccaaaactgtcctccaactccgccagtatttcctcgacggtaaccaacggagacaac
tgctgcagccccggatacactctgaacaacagctcgtcttctggaagcaggcttggggag
tacagttcctacagctcctcctacagctacagagagtcccagtcgcaccccggcctgtgc
ggcctcagcaatttgggcaacacgtgcttcatgaattctgccctccagtgcctgagcaac
gcctcgccgctcaccgagtacttcctcaacgaccagtacgaggcggagatcaacagagag
aatcccctgggaatgaggggcgagatcgccgaggcctacgcagacctggtgaagcagatg
tggctcagccgcagcagctacgtggccccgcgctccttcaaaacacaagttgggcgtttc
gctccgcagttctcgggctaccagcagcaggactcccaggagctgttggccttcctgctg
gatgggctccacgaagatctgaaccgcgtgaaaaagaagccttatcttgccctgagagac
gcggagggacgtcccgatgagattgttgctaaggaggcctggacaaaccatcgcttgcgt
aacgactccataatagttgatattttccatggtcttttcaagtccaccttggtgtgtcca
gagtgctccaaggtgtcggtaacctttgatccgttctgctacctcacgctgcctctcccg
atgaaaaaggatcgaacgttggaggttttcctggtacgctcagaccctcagtccagaccc
acacagtaccgagtggtggtccctaaactgggtactgtcacagatctgtgctgcgccttg
accaaactctgcggtgtcgctccagaaaatatgatggtggcggatgtttataatcacagg
ttccataaaatctacagacgagatgacggcctcaaccaaataatggaaaaagacgacatc
tttgtgtacgaggtgcaggaggaggacggcgagaggatgaacctgcccgtgtatttcagg
gagcgtcactccaaacacatcgggagctccacgagcaccgtgctgtttggccagccttta
ctgatcacggtgcccaaacacaacctcatcgcagacgtcctctatgacaagatcttggag
aggatagggcgttatgtgaaacacactcagagccccaacagcgacagcagggcgtcggcc
tcggcgagcttcgccagcagcagccaggccgccgaatgttccacgtcattgggcgccagc
ggcagctccctctcggacggggcgtcctgctgcgccggctccagcaacggcagcaaccac
acgggggcctgcagcgagaccaacggcctgtacgacggtgaagaggaggcgatggatcac
caggtgagtccggagccagagaacggccactccgaagaggaggaggcctctgaattggag
aatggatcgaaagcagacgccatcaagccgtgttcgcctccagccaaactgttcacgttc
agcgtcgtcaactcttacgggacggctaacatcagctcgctgccctgtgatggaaacgtc
ctccagcttaacccccactctaccgtggccatcgactgggacacggagtcaaagaagctg
cattacgacgagcaggaagctgaggcctacgagaaacatgagagcatgctgcagccgcag
aagaagaaagccacagtggccctgaaggagtgcatcgagctctttacgaccatggagaca
ctcggagaacacgacccctggtactgtccaacatgtaagaaacaccaacaagccaccaaa
aagtttgatctgtggtcgctgccacgcattctggtggttcacctgaagagattctcctac
aatcggtgttggagggacaaactggacacagtggtggactttcccatcagggatttgaac
atgtctgagtttgtgtgcgaccccaaggccagcccctacatatacgacctcattgctgtc
tcaaaccactacggaggaatgggagggggtcactacacagcttacggcaagaacaaagct
gatggaaagtggtattactttgacgacagcagcgtgtcctctgcctccgaggatcagatt
gtgactaaagcggcctacgtgctgttctaccagcgcagagacgaggaatcgccttccaaa
cctcagccgtcagcctccctcggtggagccccggatgcggccgatgaccacatggacaca
aactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

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