KEGG   Trichinella spiralis: Tsp_01343
Entry
Tsp_01343         CDS       T01609                                 
Name
(RefSeq) protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
  KO
K05955  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59]
Organism
tsp  Trichinella spiralis
Pathway
tsp00900  Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    Tsp_01343
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:tsp01006]
    Tsp_01343
Enzymes [BR:tsp01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.58  protein farnesyltransferase
     Tsp_01343
    2.5.1.59  protein geranylgeranyltransferase type I
     Tsp_01343
Prenyltransferases [BR:tsp01006]
 Protein prenylation
  Farnesyltransferase/geranylgeranyltransferase 1
   Tsp_01343
SSDB
Motif
Pfam: PPTA DUF447_N
Other DBs
NCBI-GeneID: 10911171
NCBI-ProteinID: XP_003377167
Position
Unknown
AA seq 313 aa
MKFQSNTGFIKSLTKLRDITICPNICGIACFVVLLILSPIDIIFICTMAESQCVFNSSEF
KDVQPIYLSEEESGVINIIEDVYAYFRALFNKQEISERALKLTEEAANLNPANYTVLSSK
NTERIEQRFEKRSRILLSHHRRLLIEILNDPTGELEFTQSMLQEDYKNYHAWQHRQWLIS
HFKLWDNELVYSEEMIKKDARNNSAWNYRYFVINSTTGFDAQVTEREIQMTLENIKKLPH
NESAWNYLNGIVEDRGPSSFENVVNFCEYLLSQKQTSPQLLAFLYTAYLDKFQKTEDENF
KNKAIKANVRYAS
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaatttcaatcaaatactggatttattaaaagtttgacaaaacttcgcgatattaca
atatgtcctaatatatgtggcatagcgtgcttcgttgtgcttttgattctttcaccaatt
gacatcatttttatttgcacgatggctgaatcacagtgcgtgttcaactcttcagaattt
aaagacgtgcagccgatttatctgtcagaagaagaatccggcgttattaacattattgaa
gacgtttatgcatattttcgtgccctgtttaacaaacaagaaatcagcgaacgggcattg
aaactcactgaagaggcagcgaatttgaatcctgcgaattacacagtattatcgtcgaaa
aatactgaaagaattgaacaaagatttgaaaaacgaagtagaattttgctctcgcatcat
cgacgacttttaattgaaattcttaacgacccaactggcgagttggaattcacacaatca
atgctgcaggaagattataaaaattatcatgcttggcagcatcgacagtggttgattagt
cattttaaactttgggataatgaattggtgtatagtgaagaaatgatcaaaaaagatgct
cgaaataattccgcttggaattatcgttatttcgtgatcaattctacaactggttttgat
gcgcaggttaccgaacgcgaaattcaaatgacgctggaaaatattaaaaaattgccacac
aatgaaagcgcttggaattatctgaacggtattgtggaagatcgaggtccatcttcgttt
gaaaatgtagtcaacttttgtgaatatctgctttcacaaaaacaaacctctccacaactg
ctggcatttctgtacacggcatatttggacaaattccaaaaaactgaagatgagaatttc
aaaaataaagcaatcaaagcaaatgtgcgatatgcttcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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