KEGG   Trichinella spiralis: Tsp_04886
Entry
Tsp_04886         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
Organism
tsp  Trichinella spiralis
SSDB
Motif
Pfam: TMF_TATA_bd Filament
Other DBs
NCBI-GeneID: 10912748
NCBI-ProteinID: XP_003369471
Position
Unknown
AA seq 1548 aa
MNQLNDFNHASDVKNGSISRRNFNAVNQVSQNLPEKIATFSQNASTSVASQYRRFSTYDG
ISFHRPHRKSRTTCMLYENKPSSNDESNLQCGKIILSSDMDADLVDVPLVSKSVIILVVH
CATLCKTVTFLCYCKLVDLFYKGEETKHAAVDQSLNIHRIHQRHDSISSLNSIDSIFFQS
YPSSTTQYMLTSDLESIADEESIADAHDFPDPTSRDQLSSLFNRLKGRATNYKEKYKKVA
GVYRDVFNENEKLKVRDAAFQICCVEITINLTATQDRAIEKINQLRKKHVDEVGKLQNVV
NTLEMRVCELEKIRDEEVAKHKNKVKILEDLLERCKESITGHKSSIESLTLENQSLRDEI
ENFSHKQDEPDEMGNLVMERVNLDWQRKLKAVEEDWQRKLADMEEKSNMTVAMMKQEMHE
AIQAKDAEIEQLRIHYKQMKADLQAKDCELQKALKCEQRLEKDEDLIGQFAAAKQIAIRA
VLDEEQKKRNLLVDEYEQKMEKMKFELEKQFTSKEEQLNICWSESQEQMRLAVEEREKMQ
KIAHDEETSRLKVELEALRIVSITISELKSRLEIKETELTSLEVEKKQLLELNADVEKRY
ASDLAEAVRESRLGLEKEHEKIMDEMRESCDCKLAELQGVVDQLSSNIFNLNEENLLSRR
QIDQQRSQIGKLEEENVKLEKMIHLDKENYEQTNERCLLEIQNQNHTIGELKAKCEMLEN
TQSAVEREKQRLEELLLKARDDDDSTTSEIASLQADVSSLKHQLGVCQTKLDASTDLLQV
KEVELSEYADRMQQLTESLSKKLHERDAELEKLRAELRLSTELVESDQLHADDDNADAVV
QKDLGDKVEKLKLWLERVSKSESEFCDLFNSALNGQRRILQWLLERCEVPASRFAQVEYL
ETSLKAAVCRCSNTANRLSGLCQRDAFIANDFDDIDNFAGVKQEAEVYFNETATLCLLCV
QSSFQQYAVEVHRLQDETDTLKRHCETLTTNKISLEDEVAQLSEDVDNSPGSRGAILDWI
ANLVTILHQHCTETFNLKIDRYAEPPLDKSVEELLNRAEMDRQKFVNTLQLLESGLATDD
GCEFSPKSVQSFRDGCEEFFRSLQRSILDFVANWNQTVLEKSRLSDQLNQEANNCEAMVN
ELELLKTERDRLAIELDKLCHQRQKLNDPIWRWLSTLRQDLQANEPLISRIDVDHDVDDG
HHEQKRTNLYSLLFRCVDEISASLDSDCDHSNEEVVKDCSRLENHTPPSSSSVLISLCSM
HKALIGCCVEQMRRAESARADLREKLFALTKSATATTALEKRLVESRQMVQKFQRELVTT
DRMYQQMLEDFDSKLHSNQQRLFQLLANGGALLDSVGKWNLLTTSTSSGSYVTASAGEAL
SSQSNVSLMDMSHVNCQMEDNFTQTDFHDTIADLHMKIADLETTLAENNNEMDQLRAQVS
DWNSWNDDIGVDVEHDDTNHHYHSGALQSTTIADIDELPSELELRVADLQSELEKKSQEL
NQLKNSYFSLQQVLKSKDLDEKQQQTVNREPFQSISLDDDHSSSEVLL
NT seq 4647 nt   +upstreamnt  +downstreamnt
atgaatcagttgaacgattttaatcatgcatctgatgtgaaaaatggtagtatttcaaga
cgtaactttaacgctgtaaatcaagtgagccaaaatttgcctgaaaaaatagccacgttt
tcgcagaatgcatccacaagtgttgcttctcaatacaggcgattctcgacatacgacggg
atttcgttccaccgaccccatcgtaagtcgagaactacctgtatgttgtatgagaataaa
ccatcgtcaaacgatgaatcgaacttgcaatgtggaaagataattttgtcttctgacatg
gatgctgatttggttgacgtgccattggtaagcaaatcagttatcatccttgttgtgcat
tgtgccacattgtgcaaaactgtcacttttctttgttactgtaaattggttgatttgttt
tacaagggcgaagagaccaagcatgcagcagttgaccaatcgttgaatattcaccggata
catcagcggcatgattccatttcatcattgaacagcatagacagtatattttttcaaagt
tatccctcatcaacgactcagtatatgttgacgtcggatttggaaagcattgctgatgaa
gaaagcattgccgatgctcatgattttccggatccaacttcacgtgatcaattatcatca
ctgtttaatcgtctgaaaggacgagcgacaaattataaagagaaatacaaaaaagtagcc
ggtgtttatcgagatgtgtttaacgagaatgaaaaattgaaggtacgcgatgcagctttc
caaatatgttgtgttgaaattacaattaatttgactgccacgcaagatcgtgccatagag
aagataaatcaactgagaaaaaagcatgttgatgaagtgggaaaattgcaaaatgtggtg
aatactttggaaatgagagtttgtgaattggaaaaaatcagggatgaagaagttgcaaag
cacaagaacaaggtgaaaattctcgaagatttgcttgaacgatgtaaagaaagcatcact
ggtcacaagagtagtatcgagtcgttgactttggaaaatcaaagtctgcgcgatgaaatt
gaaaacttttcccataaacaagatgaacctgatgagatgggcaatttggtaatggaacga
gtgaatttggattggcaacgaaagttgaaagcagtcgaagaagactggcaaaggaagctt
gcagacatggaagagaaaagcaacatgactgttgcgatgatgaagcaagaaatgcacgag
gcaattcaagcgaaagatgctgaaattgaacaacttcgaatacactacaagcaaatgaag
gcagatttgcaagcgaaagattgcgaactgcaaaaagctttgaagtgtgaacaaaggctt
gaaaaagatgaagatttgattggtcaatttgctgctgcgaaacaaattgccatcagagct
gttttggacgaggagcagaagaagaggaatttgcttgttgatgaatatgaacaaaaaatg
gaaaaaatgaaatttgaattggaaaaacaattcacttcaaaagaggaacagttgaatatt
tgttggtcagaaagtcaagagcaaatgcgtttggctgtggaagaacgtgaaaaaatgcaa
aaaattgcacacgatgaagaaacgagtcgattgaaagtggaattggaagctttgagaatt
gtgagtataactatttcggagttgaaaagtcgcttggaaattaaagagactgaattgacc
agcttggaagttgagaaaaagcaattgctcgaactgaatgcagatgtagaaaagcgttat
gcttctgatttggccgaagctgtcagagaaagccgcctcggtttggaaaaggaacatgag
aaaattatggacgagatgagagaaagttgtgattgtaagctggccgaattgcagggcgtg
gtcgaccagttgagttcgaacattttcaacttgaacgaggagaatttgctcagcagacgt
caaattgaccaacaacgttcacagattgggaaacttgaagaggagaatgtgaaattggaa
aaaatgatccacttggacaaggaaaactatgaacagacgaacgagcgttgtttgttggaa
attcaaaatcagaaccatactattggtgaattgaaagccaagtgcgagatgttggaaaat
acccaaagtgccgttgagagggaaaagcagcgcttggaagagttgttgttgaaagcacga
gatgatgatgattcgacgacgtcagagattgcttcgttgcaagcggacgtatcgagcttg
aagcaccagctcggggtgtgtcagacgaaattggacgccagtacggatttgttgcaggtg
aaagaggtagaattgtccgaatatgccgaccgtatgcagcagttgaccgagtcgttgagt
aaaaaattgcacgaacgtgatgcggaattggaaaagctccgagctgaactgcgcttgtcg
acagaattggtcgaaagtgaccaattgcacgccgacgacgacaatgcggatgctgtggtg
cagaaagatctgggcgataaggttgaaaaattgaaactttggctggaaagagtttcgaaa
agcgagagtgaattttgcgacttgttcaattcggctctgaatggtcagaggaggattttg
cagtggctgttggaacgttgcgaagtgccggcgagtcgtttcgctcaggtggaatatctg
gagacgagcctgaaagcggccgtttgccggtgctccaacacggccaaccgtctgagtggt
ctttgccaacgggatgcgttcattgccaacgactttgacgacattgacaacttcgccggc
gttaagcaagaagctgaagtttatttcaacgaaaccgccaccctctgcttgctctgcgtc
cagtcgtcgtttcaacagtatgccgtggaagtgcaccgactccaagacgaaaccgacact
ctgaaacgccactgcgaaactttgaccacgaacaagatatccctggaagatgaggttgca
caattgtccgaggatgtcgacaacagtcccggcagccgtggtgcaatattggattggatt
gccaatttggtgacaattttgcaccaacactgcactgagacgttcaatttgaaaatcgac
cgctacgccgaaccaccgttggacaagtcagtggaggaactgttgaacagggcggaaatg
gaccgtcaaaagtttgtgaatactctgcaactgttggaaagtggacttgccactgacgac
ggttgtgaattttcgcccaaatctgtccagtcgtttcgagacggttgtgaggaatttttt
cgctcacttcagcggagcattttggattttgtggcaaactggaaccaaactgtgctcgaa
aagagccggctcagcgaccagctcaaccaagaggctaacaactgtgaggcgatggtcaac
gagttggagttgttgaaaaccgaaagagaccgtttggcgatagagttggacaagctttgt
catcaacgacagaagctgaacgatccaatttggcgttggttgtcaacgctgcggcaagat
ttgcaagcgaatgaaccgctgatcagccgcatcgacgttgaccatgatgttgatgatggt
catcatgaacagaagcggaccaatttgtacagtttgttgttccgttgcgtcgacgagatt
tcggcaagcttggattcagattgtgaccattcgaatgaagaagtagtgaaagactgcagc
cggctggaaaaccacaccccaccctcgtcgtcgtctgtgctcatctcgttgtgttcaatg
cacaaagcgttgattggttgttgtgtggagcagatgcgtcgtgctgaaagtgctcgagct
gatttgcgtgaaaaattgttcgctttgacaaaatctgcaactgcaactacggcactggaa
aagcggttggtcgaaagtcgccaaatggtgcaaaagttccaaagggaactggtcaccacg
gatcggatgtaccaacagatgttggaagatttcgattcgaaattgcactccaaccagcag
cgactgttccaactgcttgccaatggtggtgcacttttggacagtgttggcaaatggaat
ttgttgacaacaagcaccagcagcggcagttacgtgaccgcgtcggctggggaagcattg
tcgtcccagtcgaacgtcagtttgatggacatgagccatgtgaattgtcaaatggaagat
aattttacgcagactgatttccacgacacgatcgcagatttgcatatgaaaattgccgac
ttggagacgacgttggcagaaaataacaacgagatggatcaacttcgtgctcaagtatcc
gattggaatagttggaacgacgacattggcgtggacgttgaacacgacgacaccaatcac
cactaccacagtggagctttgcagtcgaccactattgcagatattgatgaattgccatcg
gaattggaattgagagttgctgatttgcagagtgaattggaaaagaaatcacaagaattg
aatcagttgaaaaacagttatttttccttgcagcaggtgctgaaaagcaaggatttggat
gaaaagcaacagcagacagttaaccgtgaaccgtttcaatcaatttcacttgatgacgat
cattcttcttcagaagtgttattatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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