KEGG   Trichinella spiralis: Tsp_06233
Entry
Tsp_06233         CDS       T01609                                 
Name
(RefSeq) RNA-binding protein 5
  KO
K13094  RNA-binding protein 5/10
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_06233
Spliceosome [BR:tsp03041]
 Complex A
  Other components
   Complex A specific factors
    Tsp_06233
SSDB
Motif
Pfam: G-patch OCRE RRM_1 G-patch_2 zf-C2H2_4 zf-C2H2
Other DBs
NCBI-GeneID: 10908278
NCBI-ProteinID: XP_003378279
Position
Unknown
AA seq 710 aa
MSSDYRSKGYSGESSDRRLHAEHHNYDYAYDRRHRPRYRYANIEPNSTLVVKGIPLSYNE
ELVRNAVVEMGVTPIDVRILRRRESGESRGFGFIEFMSIEEATKYMERSQVKQMEMAFAL
QFNKITLTFRECEVVAMRDVNCCTTNNFKKRDHCFKCGVRREDSDPVCGDGINEIGVMPC
DTLLFRNLPYSLDEVKLTDHLNRTCAMTIQQVLIARNVENGFSRGYAYVQMTSVNDAAQL
LTTLTAVSKLIIDGRETDYTNAAAAVAQSAIKKAQVLRQAVTQVTSAALLESGAEYKLQN
TAVLMAGGGTQNEIGNLSKNVPSEESSVVVPQSSDVSLGTVDTAYGKLQRYPAPNVSQFQ
YDQTSGYYYDPTTGLYYDSNSQYFYNNTTQQFLYWDSSYQTYLPVVSSQGEDVGVGEESS
TTKDKKTAKPKQEKVKVAKKIQKDMEKWAKALNHRKEAVSTTSSSSSSSTKVVAAPEVEA
AAVAANLTISAGTADPEFQLDHHQVMVIQHGANVTTSDVENPPKKSTSVELNFLKEPDVD
WEKLVCLLCRRQFPTKDMLEKHQRLSEMHKSNLAEKQGKLNKSRQLSASSAGTTQYRDRA
SERRAKFGLDDQPHPNKLKEKFLESLECTAVATHKPAVESIGSRLMRNMGWKEGQGLGKS
NQGITNPIESERRVQGAGLGAPGSVYKANAGASYKEHVKAALRQKFFENR
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgagtagtgattatcgcagtaaaggttatagtggcgaaagcagtgatcgtcgtttacat
gctgagcatcataattatgattatgcctatgatcgacgtcacaggccgagatatagatat
gccaacattgaaccaaatagtacacttgttgtaaaaggaattcctctaagctataacgaa
gaactggttcgaaatgcagttgttgaaatgggagtgacaccgatagatgtcagaatatta
cgaagaagagaatcaggcgaaagtcgtggatttgggtttattgaattcatgagtatagaa
gaagcaactaagtacatggaacgtagtcaggtaaagcaaatggaaatggcatttgctctt
cagttcaacaaaataactctaacatttagagaatgtgaagtagtagcaatgcgagatgtt
aactgctgcactacaaataacttcaagaaacgggatcactgtttcaagtgtggtgtcagg
agagaagattcagatccagtatgcggtgatggaattaatgagattggtgtcatgccctgt
gacactctgctatttcgaaatctaccctacagtcttgacgaagtgaaattgaccgatcac
ttgaatcggacatgtgcaatgaccattcagcaggtgctaattgccaggaacgtggagaat
ggtttctctaggggttacgcctacgtacaaatgacaagcgtaaatgatgccgcacaactg
cttacaacactgacggcagtttcaaaattgattattgatggacgagaaactgattacacc
aacgccgctgcagctgttgcgcagagtgctattaaaaaggcgcaagtattacggcaggca
gttacgcaggttaccagtgccgctttgctcgaaagtggtgcggaatataagcttcaaaat
acggctgtactgatggcaggaggaggtacgcaaaatgaaattggaaacttgtcgaaaaat
gtcccgtcagaagagtccagtgttgttgtaccccagtcgtcggatgtttcccttggaacg
gtggacactgcttacggaaaattgcaacgatatcctgccccaaatgtcagtcaatttcag
tatgatcaaaccagtggatattattacgatccaactactggtttgtattatgattcgaat
agccagtatttttacaacaatacaacgcagcagtttctttactgggatagtagttatcag
acgtatttgccggtagtgtcgtcgcagggtgaagatgttggcgttggggaagagtcgtcg
acaacgaaagacaagaaaactgccaagccgaagcaggaaaaagtgaaagtagccaaaaaa
atacagaaagatatggaaaaatgggcgaaggcgctgaatcatcgcaaggaggctgtttcg
acgacgtcatcgtcgtcgtcgtcttcgacgaaagttgttgctgcaccggaagtggaagcg
gcagcagtagcagctaatttgacaatatccgccggcacggcggatcctgaatttcagctt
gatcatcatcaggtgatggtgatacaacacggcgcgaatgtgaccactagtgacgtggaa
aatccgcctaaaaaatccacatccgtagaattgaattttttaaaggagccggacgtggac
tgggaaaaattggtctgtcttctgtgcaggaggcaatttccaaccaaagatatgttggaa
aaacatcaacggttgtccgaaatgcacaagagcaatttggcggaaaagcaaggaaagctt
aacaagtcgcggcagttgtctgccagctcggccggcactactcaataccgggatcgtgca
agtgaacgacgtgcgaaattcggcctggacgatcagccacacccaaacaaattgaaagag
aaattcttggaatctttggaatgcacagccgtggccactcacaagccagctgttgaaagc
attggctctagattgatgagaaatatgggctggaaagaaggacaaggattgggaaaatcc
aatcaaggcatcaccaatccaattgaatctgagaggcgtgtccaaggtgccggcttaggg
gctcctggttccgtttacaaagccaacgccggggccagttataaagagcacgtgaaagcg
gcactgcggcagaagtttttcgaaaatcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (52)   

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