KEGG   Trichinella spiralis: Tsp_10633
Entry
Tsp_10633         CDS       T01609                                 
Name
(RefSeq) putative ATPase, AAA family
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tsp04812]
    Tsp_10633
Enzymes [BR:tsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     Tsp_10633
Cytoskeleton proteins [BR:tsp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     Tsp_10633
SSDB
Motif
Pfam: AAA AAA_lid_3 Vps4_C KATNA1_MIT RuvB_N AAA_5 AAA_14 AAA_28 AAA_22 Mg_chelatase TIP49 AAA_2 AAA_16 AAA_24 AAA_33 RNA_helicase IstB_IS21 Parvo_NS1 AAA_17 AAA_7 NACHT PhoH AAA_18 AAA_30 nSTAND3 TsaE
Other DBs
NCBI-GeneID: 10900890
NCBI-ProteinID: XP_003372389
Position
Unknown
AA seq 530 aa
MQLYSCNYPLKDTTTLLSSYCKLCFHIQNGRDSASLGLYSAARTSYGKALHLINGFLATC
TDVERREQWQSAIQTINVELSTVNSITELLEDLSRSSASRNGCAVESLVFNIEENKPWPS
PTNVDKKTSSVLLARSTNRKQHVTEFEKEKQKASSNKLFDVPRSGANSSGNSRRRLVNSN
ESTPNRPPIKKNTSAAGQKSANRPQSSEDQPVEVEKKFDSSNCDKELVEILERDIVLRNP
NIHWSDIAGLTEAKNLLHEAVVLPRIMPMFFKGLRSPWRGVCMFGPPGTGKTMLAKAVAT
ECNTTFFNVSASTLTSKYRGDSEKLVRLLFEMARFYAPSTIFIDEIDSICSRRGSESEHE
ASRRVKSELLIQMDGVISSNPNSAAGVLVLAATNFPWDLDEALRRRLEKRVFIPLPDGKQ
YSTSCRLEMLKLNLRDLKLADDLDLAEIAEKLEGYSGADLTNVCRDAAMMSMRQRIAGLE
MDEIARLHAEDLDLPITRQDFVEALARSSKSVSQQDLDKYEKWMKEFGSI
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcaactatatagttgtaattatccattaaaagataccacaactttattatccagttac
tgtaagctgtgcttccatattcaaaatgggcgtgattctgcttctctaggtttgtacagc
gcggcacgtacatcatacggtaaagcactgcacttgatcaatggctttttggctacatgt
acagacgttgaacgtcgagaacaatggcagtcggcaattcaaacgataaatgttgaattg
agtactgtcaactcgataacggaactcctggaagaccttagtcgttctagtgcatcccga
aatgggtgtgcagtagaatcattggtttttaatatagaagaaaataaaccttggcccagt
ccgacaaatgtagacaaaaaaactagcagtgtcttattggcacgttccacaaataggaaa
cagcatgtgaccgaatttgagaaagaaaagcaaaaagcttcttcaaataagttgtttgat
gttcctcgttctggtgctaatagctccggaaattcacgtcgtcgacttgtgaactcgaat
gaatcgacaccaaatcgaccgcccattaaaaagaatacttctgcagctggtcagaagtct
gctaatcgtcctcagtcgtccgaagatcagccggtcgaggttgaaaagaagtttgactca
tccaattgtgacaaggagctggttgaaattctggagcgagatattgttcttcgcaatcca
aatatacactggtcagatatagctggtttaacagaagcaaaaaatcttttacacgaagca
gttgttttgccgaggattatgcccatgttctttaagggtcttcgaagtccatggagagga
gtttgcatgtttggcccgcctggcactggaaaaacaatgctcgccaaagcagtggcaacg
gagtgcaacacaacttttttcaatgtatcagcctcgaccttaacatcaaaatatcgtgga
gattcggaaaaacttgttcgacttttatttgaaatggctcgattttacgcaccgagtaca
atattcattgatgaaattgacagcatttgtagtcgaagaggaagcgaatcagaacatgaa
gcatctcgacgcgtgaagtcagagctgctaattcaaatggatggagttattagttccaat
cctaattccgctgctggtgtattagtattggcggctactaattttccttgggatttagac
gaagcactaagacgacgtttggagaagagagtatttatacctttaccagatggtaagcag
tattctacttcatgtcgtttggaaatgttaaagctgaatctgcgtgatttaaagttagct
gacgacttagatttagctgaaattgccgaaaaattagaaggatattctggagctgatttg
accaacgtgtgcagagatgcagccatgatgtcaatgaggcagcgaattgctggattagaa
atggatgaaattgctcgactgcacgccgaggatttggacttgccaatcactcgacaagat
tttgttgaagcattggcgaggagttcgaaatcggtatcacagcaagacttggataaatat
gaaaagtggatgaaggaatttggatctatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (26)   
   Pfam (26)   
All databases (60)   

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