KEGG   Thiohalobacter thiocyanaticus: FOKN1_0047
Entry
FOKN1_0047        CDS       T05229                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
ttc  Thiohalobacter thiocyanaticus
Pathway
ttc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ttc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FOKN1_0047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttc03400]
    FOKN1_0047
Enzymes [BR:ttc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FOKN1_0047
DNA repair and recombination proteins [BR:ttc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FOKN1_0047
SSDB
Motif
Pfam: DEAD Helicase_C RecG_wedge RecG_dom3_C ResIII tRNA_anti-codon AAA_30 SNF2-rel_dom IMS_HHH SecA_DEAD SLFN-g3_helicase PhoH BrxC_BrxD
Other DBs
NCBI-ProteinID: BAZ92452
UniProt: A0A1Z4VLX4
Position
complement(39557..41689)
AA seq 710 aa
MNQKTDTKRMDARTHNDETLDRVPVTALKGVGPRLAEKLARLNIATVQDALFHLPLRYED
RTRVVPIGALQPGRRAVIEGGIDHAEIKFGRRRMLLVHLSDGTGALILRFFHFNAAQQAA
LARGMRIRCFGEVRSGPAQLEMVHPEYRRVDADTSDPDAASLTPIYPSTEGVHQLGLRNL
TDQALAWLEASPDSLPDWLGDSATAPAALPGLRAAIRLVHRPPPEVDLAALELGEHPAQR
RLVLEELIAHHLSLRVLRWRAQSLQAPVLRGDGRLRQALRGQLGFPLTAAQERVVAEIEA
DLARAHPMLRLVQGDVGSGKTVVAALAALAAVESGLQVALMAPTELLAEQHLRNFSAWLS
PLGLEPAWLSGRLKGAARRDMLARIRDGEARVVVGTHALFQEEVAFERLGLVIIDEQHRF
GVHQRLALRDKGGQEAQLPHQLTLTATPIPRTLAMAVYADLDTSVIDELPPGRKPISTVV
IPDSRRPEVVERVRRACAEGRQAYWVCTLIEESESLQCQAAEEAAAELREALPELRVGLV
HGRLKAAGKADIMQRFKAGALDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRG
RVGRGAAESHCVLLYHTPLSRQGRERLGVMRATSDGFEIARKDLELRGPGEVLGTRQTGM
MNLRIADLVRDEALLPEVERLAERLNRDHPELVPRLIRRWLAENVRYGSV
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgaatcaaaaaacggataccaagcgcatggatgcgcgtacgcataatgacgagacgctg
gaccgggtgccggtcacggcattgaagggcgtaggcccgcggctggcggagaagctcgcg
cggctgaacatcgccacggtccaggatgccctgttccacctgccgttgcgctacgaggac
cgcacccgggtggtgcccatcggggcgttgcagccgggcaggcgcgcggttatcgagggc
gggatcgatcatgccgagatcaaattcggccgccggcgcatgctgctggtgcacctcagt
gacggcaccggcgccctgattctgcgcttctttcacttcaacgccgcccagcaggccgcg
ctggcgcgcgggatgcgcatccgctgcttcggcgaggtgcgcagcggaccggcgcaactc
gaaatggtacatcccgaataccgtcgggtggatgccgacacatccgatccggacgcagcc
agtctcacccccatctatccctccaccgagggcgtgcatcagctcggactgcgcaatctc
accgaccaggcgctggcctggctggaggcgtctcccgacagcctgcccgactggctgggc
gacagcgccactgcacccgccgcgctgcccgggctgcgcgcggcgatccggctggtgcat
cggccgccgccggaggtggatctggctgcgctggaactgggcgaacacccggcccagcgg
cggctggtgctggaagagctcatcgcccatcacctgagcctgcgggtgctgcgctggcgg
gcgcagtccctgcaggcgccggtgctgcgcggcgacggccggctgcgccaggcgttgcgc
gggcagctgggctttcccctgaccgcggcccaggagcgggtggtggccgagatcgaggcc
gatctggcccgcgcccatcccatgctgcggctggtgcagggcgatgtcgggtcgggcaag
acggtggtggcggcgctggcggcgctggcggcggtcgagtccggcctgcaggtggcgctg
atggcgcccaccgagctgctggccgagcagcacctgcgcaacttcagcgcctggctcagc
ccgctgggactggagccggcctggttgtcgggccggctcaagggtgcggcgcgccgggac
atgctggcgcgcatccgcgacggcgaggcccgggtggtggtcggcacccatgccctgttc
caggaggaggtcgccttcgagcgcctgggcctggtgatcatcgacgagcagcaccgtttc
ggggtgcaccagcgcctggccctgcgcgacaagggtggacaggaggcacagctgccgcac
cagctcaccctgaccgccacccccatcccgcgtaccctggcgatggcggtgtatgccgac
ctggacacctcggtgatcgacgaactgccgcccgggcgcaaaccgatcagtactgtggtc
attcccgacagccgccggcccgaggtggtcgagcgggtgcgccgggcctgcgccgagggg
cgtcaggcctactgggtctgtaccctgatcgaggaatccgagagcctgcagtgccaggcg
gccgaggaggccgccgccgagctgcgcgaggcgctgccggagttgcgggtgggacttgtc
cacggccggctcaaggccgccgggaaggcggacatcatgcagcggttcaaggccggggcg
ctggacctgctggtggccaccaccgtgatcgaggtcggggtggacgtgcccaacgcctcg
ctgatgatcatcgagaacgccgaaaggctgggactggcccagctgcaccagctgcgcggc
cgggtcgggcgcggggcggcggaaagccactgtgtgctgctctaccataccccgctctcc
cggcagggcagggaacgcctgggggtgatgcgcgccaccagcgacggcttcgagatcgcc
cgcaaggacctggagttgcgcggtccgggcgaggtgctggggacgcgccagaccggcatg
atgaatctgcgcatcgccgacctggtgcgcgacgaggcgctgctgcccgaggtggagcgg
ctggccgagcggctcaaccgtgaccatccggaactggtgccgcggttgatccgccgctgg
ctggccgagaacgtacgctacggctcggtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (56)   

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