KEGG   Thermus thermophilus HB27: TT_C1171
Entry
TT_C1171          CDS       T00170                                 
Name
(GenBank) putative ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
tth  Thermus thermophilus HB27
Brite
KEGG Orthology (KO) [BR:tth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tth03016]
    TT_C1171
Enzymes [BR:tth01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     TT_C1171
Transfer RNA biogenesis [BR:tth03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    TT_C1171
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: AAS81513
UniProt: Q72IG1
Position
1137730..1139529
AA seq 599 aa
MLRGVAALVVYKGKPALAEEKGGRLELTLEGGARQRVRPKDVLFLHPGPASLDLKVPEGE
EEAAWELLEGQTVSLRELAELVYGAYTPEAALGAYLLAQKGERFVLEGEGVRARTREELL
ALQEAERKRAERERAFQEALKRLKEGSPAPEDRPLLAEVEALARGERKESPVLRALNLPE
TPEAAHAFLLRLGLWQRENPHPRRLGLPLQPPDLPVPPLPEEDRVDLTHLPAFAIDDEGS
QDPDDAVFAEKVEGGFRLFVHVADVAALVPPKSPLDEEALRRGANLYLPEGTVPMLPPAV
TEALGLGLREVSPALTFELWVSEEGELLEERVYPSWVRVTRLTYREALGVEALRPLEALA
EAFRAKRLAAGALEIALPEVKVRVEGEEVRITPLPPYPSRVWVREAMLLAGYAAAHLAVR
EGLPFPFATQEAPARRVEGEGLAAMWEQRKALKRAQLKAVPAPHKGLGLPLYAQVTSPLR
RYLDLVAHQQLRAWLKGERPLSQAEVLERVGAAEAVADLVREAERKSKLHWTLLHLEAKG
YEGPGVLVERRGGQGVFLLPELGLTAQVALPKALPLNAEARLRFLEADLPALEARFALV
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgctaaggggcgtggccgcgctcgtcgtctacaaaggcaaacccgccctcgccgaggag
aaggggggccgcttggagctcacgctggaagggggcgcaaggcagagggtgcgtcccaag
gacgtcctcttcctccacccggggcccgcctccttggacctgaaggtgcccgagggggag
gaagaggccgcctgggaactcctggaggggcagacggtgagcctcagggagctcgccgag
ctggtctacggggcctacaccccggaggccgccctaggcgcctacctcctcgcccagaag
ggggagcgcttcgtcctcgagggggaaggggtccgggcccgcacccgggaggagcttctg
gccctacaggaggcggaaaggaagcgggcggagcgggaacgggccttccaggaggccctg
aagcgcctaaaggagggaagccccgcccccgaggaccgccccctcctcgccgaggtggag
gccctggcccggggggagaggaaggaaagccccgtcctccgggccctgaacctccccgaa
acccccgaggcggcccacgccttcctcctccgcctgggcctttggcaaagggaaaacccc
cacccaaggaggctcggccttcccctccagcccccggacctccccgtcccacccctcccc
gaggaggaccgggtggacctcacccacctccccgccttcgccatagacgacgagggaagc
caggaccccgacgacgccgtcttcgccgagaaggtggaagggggcttccgcctcttcgtc
cacgtggccgacgtggccgccctcgtcccccccaaaagccccctggacgaggaggccctg
cgccggggggcgaacctctacctccccgagggaaccgtgcccatgctcccccccgccgtc
accgaggcccttggcctgggcctaagggaggtctccccggccctcacctttgagctatgg
gtctcggaggagggggagcttctggaggagagggtctacccctcctgggtacgggtcacg
cgcctcacctaccgggaggccctgggggtggaggccctgaggcccctggaagccctggcg
gaggccttccgggcgaagcgcctcgccgcgggcgccctggagatcgccctccccgaggtg
aaggtgcgggtggagggggaggaggtccggatcacccccttgcccccctacccaagccgc
gtctgggtgcgggaggccatgctcctcgccgggtacgccgcggcccacctggcggtgcgg
gaggggcttcccttccccttcgccacccaggaggcccccgcaaggcgggtggagggggag
gggcttgccgccatgtgggagcagcggaaggccctgaagcgggcccagctcaaggcggtg
cccgccccccacaagggcttaggccttcccctctacgcccaggtgacgagccccctaagg
cgctacctggacctggtggcccaccagcagctcagggcctggctcaaaggggagaggccc
ctctcccaggccgaggtcctggaaagggtgggggcggcggaggcggtggccgacctggtg
cgggaggcggagcgcaagagcaagctccactggaccctcctccacctcgaggccaagggc
tacgaggggcccggcgtcctggtggaaaggcggggggggcagggggtcttcctcctcccc
gagctcggcctcaccgcccaggtggccctgcccaaggcccttcccctgaacgccgaggcc
cgcctccgcttcctggaggcggaccttccggccctcgaggcccgcttcgccctggtctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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