KEGG   Thermobaculum terrenum: Tter_0708
Entry
Tter_0708         CDS       T01134                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ttr  Thermobaculum terrenum
Pathway
ttr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ttr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tter_0708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttr03021]
    Tter_0708
   03400 DNA repair and recombination proteins [BR:ttr03400]
    Tter_0708
Enzymes [BR:ttr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tter_0708
Transcription machinery [BR:ttr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Tter_0708
DNA repair and recombination proteins [BR:ttr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Tter_0708
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 Peptidase_M23 RnfC_N
Other DBs
NCBI-ProteinID: ACZ41625
UniProt: D1CFB9
Position
1:768593..772204
AA seq 1203 aa
MTNTSQVRPSVEAQTRPASKVQRKSYARIPDTIEMPNLIQIQLDSFNWFKEEGLQELFDE
INPVVDFTGRLMELRFDKPDSGQFFGEPRYTEKECRERDFTYSAPLKVKATLLVKETGEI
KEQEIFLGDFPLMTEKGTFVINGAERVVVSQLVRSPGVYFKDVFDEASGKTLWTAKLIPN
RGAWLEFETSNKDVLYVKVDRKRKIPVTVLLRAVAAIDSEVVEAEGDMGPTTPGTDEWLW
ALYGKVSRDGRYQNLAATIERDPTKNSQEALVELYRRLRPGDPPNPENARTLLRQLLFDP
RRYDLARVGRYKLTRKWEQLREVVARSNGPTFDFEIDSRVYGERLRTITGRDLINIVGNL
IRLNNLPPGSEEEGDDIDHLGNRRVRAVGELIQNQFRVGLLRMERVIKERMSIQDAESAT
PNNLINIRPVVAAMREFFGGSQLSQFMDQVNALSEINHKRRLSALGPGGLSRDRAGLDVR
DVHPSHYGRICPIETPEGPNIGLIGQLATYARINEYGFIETPYRKVVKSVPGDSIDAMVG
HITREPIMDSNGQEVVPVGTEITREVAEKIVALGLDEIKVKPRVLNEVEYLSADREDLFT
VAQANSPLDERGYFLEDRVEARASIRLRRGGTEFMIVPVDEVDYVDASPKQVVSVASSLI
PFLEHDDANRALMGANMQRQAVPLLVPDSPVVGTGVEAQVARDSGQVVIAKADGIVRSVT
AERIVVEEDDGNLRTYELEKFVRTNQDTLLNQRPIVNKGDRIYAGQIIADSASTSNGEIA
LGQNVLVAFMPWEGGNFEDAVLISERLVRDDVYTSIHIEKYEVEARDTKLGPEEITRDIP
NVGEEALANLDERGIVYVGAEVKPNDILVGKVTPKGETEMTAEERLLRAIFSEKARDVRD
TSLRVPNGVHGQVIDVKVFTRVENDDLPAGVNQMVRVMIAQKRKISEGDKVAGRHGNKGV
ISRILPIEDMPFLPDGRPVDVILNPIGVPSRMNLGQILECHLGWAASTLGFKVACPVFDG
ASEEMIKEELRRAGLPEDGKIELYDGRTGEKFDQPVAVGVMYIMKLAHLVEDKIHARSTG
PYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDTVGRVRTYEAIV
KGEPISGAGVPESFKVLMKELQSLGLSVEVLNEDLVPVSISSDGQSEYISDLDIDLSHPE
KGE
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgacgaacacctcgcaggtcagacctagcgttgaagctcagacacgtccagcatctaaa
gttcaaagaaaatcctatgctcgtataccagataccattgaaatgcccaacctcattcag
atccagttggattcatttaactggtttaaggaggaagggcttcaggagctctttgatgaa
ataaatccagtagtagacttcactggtcgtctaatggagctccgtttcgataagccagat
tccggtcagttctttggggagcccaggtataccgaaaaggagtgcagagaaagagatttc
acttattccgcacccttgaaggtgaaggctaccctgctggtcaaggagaccggtgagata
aaggagcaggagatatttctgggtgacttccctctcatgaccgagaagggtaccttcgtt
ataaatggagctgagagggtggttgtctcccagcttgttagatcgccaggcgtgtatttc
aaggatgtattcgatgaagccagtggtaagaccctctggaccgcaaagcttataccgaac
cgtggggcctggctcgagttcgagacctctaacaaagatgtgctatatgtcaaggtagat
cgcaagcgcaagattcctgtgaccgttctcctgagagcagttgctgccatagattcagag
gttgttgaggctgaaggcgacatgggcccaactactcctggtacagatgagtggctatgg
gctctatatggtaaggttagtcgcgatggccgctaccagaatcttgcagctacgatcgag
cgagatccaacaaagaacagccaggaagctttggtggagctttaccggaggcttagacct
ggcgatcctcccaaccctgagaatgctcgtacgttgttgcgtcagttgctatttgacccc
cgcagatacgatctggctagggtcggtagatataagctcactcgcaagtgggaacagcta
cgcgaggtagttgcgaggtctaatggccccacatttgatttcgagatcgatagccgggtg
tacggtgaaaggctaagaacgataacgggacgcgacctgatcaacatcgtagggaacctt
ataaggttgaataacctacctcctggcagcgaggaggaaggggacgatatagatcatctg
ggtaataggcgagtcagggcggttggtgagctgatacaaaatcagttccgcgttggtctg
ctccgtatggagagggtcataaaggagcgcatgtccatccaggatgctgagagtgctact
cctaacaacctgataaacatccggcctgtagtggccgctatgcgagaattctttggcggc
agccagctatcgcagttcatggatcaggtgaacgcgctctcagagatcaaccacaagaga
agattgtctgctcttggtcctggtggtcttagcagagatagagctggtctggatgtgcgc
gatgtgcacccatctcactatggacgtatatgtcctattgagactcctgaaggtcctaac
atcgggcttattggtcagttggcaacgtatgccaggatcaatgaatatggtttcatcgag
actccttaccggaaggtagtgaagtcggtacctggtgattctatcgatgccatggttggc
catataaccagggagcctataatggactccaacggtcaagaagttgtgcctgtaggtact
gagataacccgggaggtggctgagaagatagtcgccctaggtcttgatgaaatcaaggtc
aagcctagggtcttgaacgaggttgagtacctgtcggctgatagggaagatctgtttact
gttgctcaggccaactctcctctcgatgagagaggttacttccttgaggatagagtcgag
gctcgagctagcattcgcctgcgtcgtggaggcacagagttcatgatcgtcccagttgat
gaggtggactacgttgatgcctctccgaagcaggtcgtcagtgtagcgagttcgttgatt
ccgttccttgagcatgatgatgctaacagggctctgatgggtgccaacatgcagaggcag
gctgtgcctctgttggtgcctgattctccagtggttggcacaggtgtcgaggctcaggtt
gcccgagatagcggtcaggtggtgatagctaaggcggacggtatcgtgcgtagtgttact
gccgagaggatagttgtcgaggaagacgacgggaacctgaggacctacgagctcgagaag
ttcgttcgcactaaccaggatacgcttctcaaccagcgtccgatagttaacaagggcgat
aggatctatgctggacagataatcgctgattccgccagcacaagcaatggcgaaatagcc
ctcggccagaatgtgcttgtggcgttcatgccgtgggagggaggtaactttgaggatgct
gtgctgatcagcgagaggctagtgagagatgacgtatatacctcgatacatatcgagaag
tacgaggtagaggcacgtgataccaagctcgggccggaggagataactcgtgatatcccc
aacgtgggcgaagaggcactggctaacttggatgagagaggcatagtctatgtaggcgct
gaggtcaagcccaacgacatactcgtgggtaaagtcacacctaagggtgagacggaaatg
actgctgaagagcgcctgctaagagctatattctcggagaaggcccgtgatgttagagat
actagcctccgggttcccaatggtgtgcacggccaggtgatcgacgtaaaggtgttcacg
cgggttgaaaatgatgacctgccggctggtgtaaaccagatggtcagggtgatgatagcc
cagaagagaaagataagcgagggcgataaggtcgcgggtaggcacggtaataagggcgtt
atatccaggatactcccgatagaggatatgcccttcctaccagatggtagacccgtggat
gttatcctgaacccgataggtgtgccctcaagaatgaacttgggacagatcctggagtgc
catcttggatgggcggctagtactcttggcttcaaggtggcgtgtcctgttttcgatgga
gcttctgaggagatgatcaaggaagagctccgcagggcagggctaccagaagatggaaag
atagagttgtacgatggtcgtacgggcgagaagtttgatcagccagtggctgtgggtgtc
atgtacatcatgaagctggctcacttggtggaggacaagatacatgctcgatccacaggt
ccttacagcctagttacccagcagcctctgggaggcaaggctcagttcggtggccagagg
tttggcgagatggaagtatgggctctcgaagcatacggagctgcctatactttgcaggaa
atgctcactgtcaagtctgatgatacagttggtagagtccgtacttacgaggcgatagtc
aagggtgagccaataagtggtgcgggcgtgccagaatcattcaaggtattgatgaaagag
cttcagagccttgggttgtctgttgaggttctcaatgaagatttggtgccggtgtccata
tccagcgatggtcaaagtgagtacataagtgatttggatatagatctaagccatcctgag
aagggcgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (47)   

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