KEGG   Thermothielavioides terrestris: THITE_2123949
Entry
THITE_2123949     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03022  Basal transcription factors
ttt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    THITE_2123949
  09124 Replication and repair
   03420 Nucleotide excision repair
    THITE_2123949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttt03021]
    THITE_2123949
   03400 DNA repair and recombination proteins [BR:ttt03400]
    THITE_2123949
Transcription machinery [BR:ttt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     THITE_2123949
DNA repair and recombination proteins [BR:ttt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     THITE_2123949
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 11521834
NCBI-ProteinID: XP_003657840
JGI: Thite2_2123949
UniProt: G2RI42
Position
6:complement(1895328..1896707)
AA seq 459 aa
MSAQDVVDASEHYEVYNTDDIPSLCTIIIDTNPRAWAALADVLPISKAIANILIFVNAHL
AFSNSNQVALIASHTNRAVWLYPAPPKQAPAPSEDVDMRDAGSSSDKPAPSYKPSAANKY
PQFAQIEHILLTSLRSLIDDTTVSDLSTTTQISGALTLALAHINKTALSFAASAAAANAL
TTTGAPMTAGAAVGAAPVASTSTSGGGLAGMHARILILSVSDSSPAQYIPTMNAVFAAAH
ARIAIDTLSLRGSATFLEQASFITRGTFIRAAEPRGLLQYLMFGFGSGSAPSHPAAGGGG
AGGTDAGKGPASKPKTSASTANGGGAAGRGRPKPGGASSSSRLGLGASVAELLVTPSADA
VDFRAACFCHRNVVDTGFVCSICLSIFCEVPDGGECLTCGTRLALGNYGRTPVVAPPPPP
AGNPAAGGGAGGVGVGVGGGAGSPNAARKEKEKRKVEAQ
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgagcgcccaggatgttgtcgacgcctcggagcactatgaggtctacaacaccgacgac
atcccgtcgctctgcaccattatcatcgacaccaatccccgagcgtgggctgcgctcgcc
gatgtcctcccgatctccaaggcgatagcgaacatcctcatcttcgtcaacgcccacctc
gcattcagcaactcgaaccaggtggccctcatagcatcacacacaaaccgagcggtttgg
ctctacccagcgccgccgaagcaggcgcccgcgccctcagaagatgtcgacatgcgagat
gcaggcagcagcagcgacaagcccgcaccgagctacaagccctccgcagccaacaaatac
ccccagttcgcgcaaatagaacacatcctcctaacgtctctccgttctctcatcgatgac
accaccgtctccgacctctccaccacaacacaaatatccggcgcgctcaccctcgctctc
gcccacatcaacaagaccgcactgtctttcgccgcctctgccgccgcagccaacgccctg
accacaaccggcgccccaatgaccgcgggtgccgcggtcggcgccgcgcccgtggcaagc
acgtccacgagcggcggtggcctcgccgggatgcacgcgcgcatcctgatcctctccgtc
agcgacagctcgccggcgcagtacatcccgaccatgaacgccgtcttcgcggccgcgcac
gcccgcatcgccatcgacaccctctccctgcggggcagcgccacctttctcgagcaagcc
agcttcatcacgcggggcaccttcatccgcgccgccgaaccgcgcgggctgctgcagtat
ctcatgttcggcttcggcagcggcagcgcgccgtcccacccagccgccggaggaggagga
gcaggaggcaccgacgcgggcaaggggccggcatccaagcccaagacctccgcctccacc
gccaacggcggcggcgcagcaggccgcggcaggccaaagccaggcggcgccagcagcagc
agcaggctgggcctgggcgccagcgtggcggagctgctggtcacgccgagcgcggacgcg
gtcgacttccgcgcggcctgcttctgccaccgcaacgtggtcgacacgggcttcgtgtgc
agcatctgcctcagcatcttctgcgaggtgcccgacggcggcgagtgcctgacctgcggc
acgcgcctggcgctcgggaactacggccggacgcctgtcgtcgcgcctcctcctccgccc
gctggcaatccagctgcgggcggcggggccgggggtgttggtgttggtgttggtggtggt
gctggctcgccgaatgcagccaggaaggagaaggagaagcggaaggttgaggctcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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