KEGG   Tupaia chinensis (Chinese tree shrew): 102472548
Entry
102472548         CDS       T02978                                 
Symbol
APLF
Name
(RefSeq) aprataxin and PNKP like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tup03400]
    102472548 (APLF)
DNA repair and recombination proteins [BR:tup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102472548 (APLF)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102472548 (APLF)
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl HUN
Other DBs
NCBI-GeneID: 102472548
NCBI-ProteinID: XP_006151357
Position
Un
AA seq 505 aa
MSGGFELQPQDGGPRVVLAPGETGIGRGPQLGITDKRVSRRHAILEVMGGQLRIKPIHTN
PCFYQSSEKSRLLPLKTNLWHCLNPGDRFSLLVDKYIFRVFSTCSETELECTLRNSQMPS
EDNLLNETPKSPAINLSDETTGATQLERSTEITKTQTTNTDSMSFPGECSKQQPNLAQRK
RILPAWMLENLSDQDLSISIISGGNVIQGSGKKGLWKDKTSENISQQGRKRSVLSGSSKS
TLAKQDTGKKYKNSDQEESIISSKEMPQSLPPNTLSNPEGNTKTKTKRSKISIKKVGEVS
EHNNITKGAPDKEEAMSGSQSFSSAQGKSSNDESQGSHPESSSDSSNLETLHAKATDSVP
EGPEDNKVKRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGSPVMNQEDTDDRPECPYGAS
CYRKNPQHKIEFKHSTLPVRDALDEDDDVGQPSEYDLNDSFLDDEEEEYEPTDEDSDWEP
GKEEQEKEDVEELLKEAKKFMKRKK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtccgggggcttcgagctgcagccccaggacggcggtccccgggtggtcctggcgccg
ggggagacggggatcggccgcgggccacagctgggaataacagacaagagagtatccaga
agacatgccattcttgaggtgatgggtggtcagcttcgaatcaaaccgatacacacaaac
ccatgtttttatcagtcttccgagaagagccgactcttaccattgaagacaaatttatgg
cactgtttgaatcctggagataggttttctttgttagttgacaaatatattttccgtgtt
ttttccacatgctctgagacagaattggaatgtaccttgagaaacagtcaaatgccaagt
gaagataatctgttgaatgaaacaccaaaatctcctgcaattaatttatctgatgagaca
actggtgccacgcagctggaaagaagcacagaaataaccaagacccagacgactaacaca
gatagcatgtcttttccaggtgaatgtagtaagcaacagccaaaccttgcccagaggaaa
agaattcttccagcatggatgttagaaaatttaagtgatcaagacctttccatatctatc
attagtggaggtaatgtaattcagggaagtggaaaaaaaggactctggaaagataaaacc
tcagaaaacatatcacagcaaggaagaaagagatcagttttatcaggaagttcaaaaagt
acattggcaaaacaagacacaggaaaaaagtacaaaaattctgatcaggaagagtctatc
atttcctccaaggaaatgccacagtcattacctccaaacacattaagtaacccagaaggg
aatacgaagactaaaacaaaaagaagcaaaatttcaataaagaaagttggtgaagtttct
gagcataataacatcactaaaggagcacctgataaagaagaggcaatgagtggttctcag
agtttttcaagtgcccaaggcaagtcatccaatgatgagtctcaaggatctcatcctgag
tctagctctgattcctccaatcttgagactttgcatgcgaaggccactgattcagttcca
gaaggtcctgaagacaacaaggtcaagaggacatcctgcatgtatggagcaaattgctat
aggaagaatcctgtccattttcaacacttcagccatcctggcgatagtgattacggaggt
tcgccagtcatgaatcaagaagacactgatgaccgacctgaatgtccctatggagcatct
tgttacaggaagaatcctcagcacaagatagaatttaaacacagtacacttccagtgaga
gatgctttggatgaagatgacgatgttggacagcccagtgagtatgacctgaatgacagc
tttctagatgacgaagaagaagagtatgagccaacggatgaggactctgactgggaacca
gggaaggaagaacaagagaaggaagatgtagaagagcttttgaaagaagcaaaaaagttt
atgaaaagaaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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