KEGG   Tupaia chinensis (Chinese tree shrew): 102473077
Entry
102473077         CDS       T02978                                 
Symbol
SYNM
Name
(RefSeq) synemin
  KO
K10376  desmuslin
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tup04812]
    102473077 (SYNM)
Cytoskeleton proteins [BR:tup04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     102473077 (SYNM)
SSDB
Motif
Pfam: Filament
Other DBs
NCBI-GeneID: 102473077
NCBI-ProteinID: XP_014448242
Position
Un
AA seq 1379 aa
MESQRPSFHSQKLAALGREATVANASADVLPLAARGRALSGRAAFRPTSSVFQFRGLTSR
SRAKCNSLLPSSLLYLSSVLLEMGNSTSHFLGAISSHERWDTGARVIECLEDEKAALTAV
MADRLRDYQELVQVKTGLSLEVATYRALLEGESNPEILIWTKHIETMPQEFRNTSYCYSD
SVLQRENERNRFPRQKVPLANLNHGSALHSNLSGHLGSQTTTSMESAGRRGFPGSSPSSV
STTWQENSYEKTISSQTNSRTFSPTYGLSRNTDVSVKTFPDRSKTEGRRDVSTVVQESHR
ERRDRAVAGASESTRSKERTVILEKKTEVDVTRERERNRPGAIRKKQEEMLFDSKEKASE
ERNLRWEELTKLDKEARKREMQQMNEKAKGKDALKERHVKGRDIPIHLEGPQARRPAEVT
PKGLQMPVKKDADDGSGRQKETREARFKLSPSDPADSLEGDSTTETVAENIVTSILKQFT
QTSNTEATANSFPDTKVIYVEKKELPGDKKTKTEIVLESKLTEDVDISDQAGLDYLLSKE
AKEVGLKGKSTEQMIGDIINLGLKGRDGRARVVNVEIVEEPMSYVGGEKAGEFSTPFEVE
EVDDVSPDPKRFTEEEGSYGETDGTFLGHPRHRTRQENVTHFEEVMEAGDSEGEQSYFVS
TPEEHPGGPDRDDDEGSVYGQIHIEEESTIRYSWQDEIVQGSWRRRKQGDHEGEIMNVPE
ASPADAERTHWTEQSRSGEFHAEPTITEKEIKIPHEFHASIKGVSSKEPRHQLVEVIGQL
EQTLPERVKEELSALTREEDSELGGVSVDVKKVQTPGSGSVTLVAEVNLSQTVDADQLDV
EQLSRDEASEIEKTVESVVRDNVTRRQGQAPGSPDRDERMESPVSGLGFKRWATRELYSP
SGEREDGGRASYSMEQLSPQGPVSATVEVSSPQGFAQSVRHVQLGPTAFWKTEQVSYEGP
TVQVAQVSGEDVPSQAAILVGTSLSLRPLMLGLEPSQVSREVFLQGPIPFLQEVGSAEEL
EAPDLSTDANLSGKQGSFGFQQVRVEKAAIVQGSTSGAGKVGDESASTQTSVSHLQVGPK
HGFSEPIQLTVPLSDRTGLGIKTGSVNTEGSSGIHTSVSHISITPRGHQGAEWVVDPGLV
PHPVEFRDPDSAIPLQSSAAVTQVTTTHTLGSKTFMTEKSTFQRVALESPREDGSGDTSG
ADVTSGVSRSFRHIQLGPTDTDTSEHIVIRAPASVTRGLAGSARLPERGDPADGSRTLRL
IDLGPKETSFTFQMDVSNVEATPRWTPGAGTEGEAPSASGWGAWRDAGSTCDPASGTSFQ
AAAGDRHQAQGEQHTEEATFDKTVQLQRMVDQRSVISDDKKVALLYLDKEEEEDDGHWF
NT seq 4140 nt   +upstreamnt  +downstreamnt
atggagtcacagaggccaagttttcacagccaaaagctggctgcattaggacgggaagcc
accgtagctaacgcctctgcagacgtcctcccgctggccgccagggggcgcgcgctcagc
ggccgggcggcgttccgcccgacctccagcgtcttccagttccgggggctgacctccaga
agccgggctaaatgcaatagtcttcttcccagttctttgctatatctgagctccgtttta
ctggaaatgggtaacagtacgtctcacttcctgggcgctatttccagccatgaacgctgg
gacacgggtgcgagagtgatcgaatgcctggaggatgagaaggcggccctcaccgcggtc
atggctgaccggctgcgggactaccaggagctggtgcaggtgaagaccggcctcagcctg
gaggtggcgacctatcgggccttactggaaggagaaagtaacccagagattctgatctgg
acaaagcacattgaaaccatgccacaagaattcagaaacacatcctattgctacagtgac
tctgtgctacagagggaaaacgagagaaatcgcttcccccggcagaaagtgcccctggcg
aatttaaatcacggctcggcacttcattctaacctgtcagggcacttggggtcgcaaaca
accacatcgatggaaagtgccggaaggagagggttcccgggctcaagcccttcctctgtg
tctactacctggcaagagaactcttacgaaaaaaccatcagcagtcaaaccaattccaga
actttctctccaacctatggtctctcaagaaatactgatgtgtcagtgaagacattcccc
gacagatcaaagacggaagggaggagggatgtctccacggttgtccaagaatcccaccga
gaacgccgagacagggccgtggcaggtgcttctgaaagcacgcgctcaaaggagaggact
gtcattttggaaaagaaaacagaagtggatgtcacgagggagcgagaaagaaataggccg
ggagccatcagaaaaaaacaagaagagatgctgtttgattctaaagagaaggcttcagaa
gaaagaaacttacgatgggaagagctgaccaagttagataaggaggcgaggaagagggaa
atgcagcaaatgaacgagaaagccaaagggaaggacgcactgaaggagagacacgtgaag
ggaagggacattccaattcatctggaaggaccccaggcccgcaggcctgcagaggtgacc
cccaaaggtttgcagatgcctgtaaagaaggatgctgatgatggctcggggagacagaag
gaaacgagagaggcaagatttaagctgagccccagtgaccccgctgactctctggagggt
gactcgacgacagaaaccgtagcagaaaacatcgtcaccagcatcctcaaacagttcacc
cagacttccaacaccgaggcaactgctaactcttttccagacacaaaagtcatttatgtg
gagaagaaagaacttccgggggataagaaaactaagaccgagattgtcctggaatctaaa
ctgacggaagacgttgatatttcagatcaagccggtctggactacctcttgagcaaagaa
gccaaggaagtagggctgaaagggaagtcgactgagcagatgatcggagacatcatcaac
cttggtctgaaaggcagagacggtcgggccagggttgtcaacgtggagatcgtagaggag
cccatgagctatgtcgggggcgagaaggcaggggagttctccacccccttcgaagtggag
gaggtcgatgacgtatctccggaccccaagaggtttactgaggaagaggggagttatgga
gaaaccgatggaacattcttgggtcatccacgccatcggaccaggcaagagaatgtcact
cactttgaagaggtgatggaagcaggtgactcggagggagaacagagttattttgtgtca
actccagaggagcaccccggggggcctgacagggacgatgacgagggctcggtgtatggg
cagatccacatcgaagaagaatccaccatcaggtattcttggcaagatgagatcgtgcag
ggcagttggagacgaaggaagcagggtgaccacgagggagagattatgaatgttccggaa
gcttctccggcagacgccgaaagaactcattggacagaacagtctagaagtggcgaattt
catgccgaacccacaattactgaaaaagagatcaaaataccccatgagttccatgcctcc
attaagggggtctcgtccaaggagccccggcaccagctggtggaggtcattgggcagctg
gagcaaaccctaccagagcgcgtgaaggaggagctgtctgccctcaccagggaggaggac
agcgagctggggggtgtgtcggttgatgtcaagaaagtccagacccctggcagtggttcc
gtgaccttggtggccgaagtcaacctgtcacagacggtggatgccgatcagctggatgtg
gagcagttgagcagggatgaggccagcgagatagagaaaaccgtggagtccgtggtacga
gacaatgtgaccaggcgacagggtcaagcacccggaagcccagacagggatgagagaatg
gagtccccagtttctggccttggcttcaagcgctgggccaccagggaactgtacagccct
tctggtgagagggaagatggcggccgggcctcttacagcatggaacagctcagcccccag
ggccccgtgtcggccaccgtggaagtcagcagcccccagggctttgcccagtctgtgagg
cacgtgcagcttggtcccactgcattctggaagactgagcaggtctcctatgaaggaccc
acggtgcaggtggcgcaggtaagtggggaagatgtcccgagtcaggcagccatcttggta
ggaaccagcctgtctctgaggcccttgatgttgggtcttgagccaagccaagtgtccaga
gaagtcttcctccaaggccccatccctttccttcaggaagtggggagcgcagaagaactg
gaggccccagacctttccacagatgccaacctgtctgggaagcagggctcgtttggcttc
caacaagttcgtgttgaaaaggcagccattgttcaggggtccacctctggggcagggaag
gtgggtgatgagtcagcgagtacccagacttccgtgagtcaccttcaggtaggccctaaa
cacgggttcagcgaaccaatccagctcacagtccccctttcagacagaacggggctgggc
atcaaaacaggttctgtaaacactgaaggttcgtctgggatccacacgtctgtcagccac
atcagcatcacacctcgggggcatcagggcgccgagtgggtggttgaccccgggctggtt
cctcaccctgtggaattcagagacccagatagtgccatccccctacagagctcagctgcc
gtaacccaagtcaccactacccataccttggggagtaaaaccttcatgaccgaaaagagc
accttccaaagggtggctttggaatctcccagggaggatggttcaggggacacatccggg
gcagacgtgacatcgggcgtcagcagatcctttagacacattcagttaggtcctacagac
accgacacctctgaacacattgtcatccgtgcacccgcgtccgtgacacgtgggctggct
ggttcggcacgcctccccgagcgaggtgaccctgcagatggcagcagaacactgaggctc
attgacctggggcccaaagaaacttcatttacctttcagatggacgtgagtaacgtagag
gccaccccgcgctggacaccaggggcggggacagaaggggaagctcccagtgcatctggc
tggggtgcctggagagacgctggcagtacgtgtgacccagcctccggcacaagctttcag
gcggctgctggggacagacaccaggcccagggagagcaacacacggaagaggccacgttt
gacaagacggtgcagctgcagagaatggtagaccagaggtctgtgatctcggatgacaag
aaagttgcactgctttatctagacaaggaggaggaggaggacgatgggcattggttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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