KEGG   Tupaia chinensis (Chinese tree shrew): 102494366
Entry
102494366         CDS       T02978                                 
Symbol
DDX56
Name
(RefSeq) DEAD-box helicase 56
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tup03009]
    102494366 (DDX56)
Enzymes [BR:tup01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102494366 (DDX56)
Ribosome biogenesis [BR:tup03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102494366 (DDX56)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 102494366
NCBI-ProteinID: XP_006166083
Position
Un
AA seq 552 aa
MEDAESLGFEHMGLDPRLLQAVSDLGWSRPTLIQEKAIPLALDGKDLLARARTGSGKTAA
YALPMLQLLLHGKTTGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDIRVANVSA
AEDAASQRAVLMEKPDIVVGTPSRILSHLQRDSLKLRDSMELLVVDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVICET
EEDKLLLLFFFLLLYALLKLSLVRGKSLLFVNTLERSYRLRLFLEQFSIPSCVLNGELPL
RSRCHIISQFNQGFYDCVIATDAEVLGAPVKGKRQGRGPKANKASDPEAGVARGIDFHHV
SAVLNFDLPPTPEAYIHRAGRTARANNPGTVLTFVLPVERPHLNKIEELLGGENRAPVLL
PYQFRMEEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLL
RHDLPLHPAVVKPHLGHVPEYLVPPALRGLVRPHKKRKKPSSCRKTKKVKTQNPLRSFKH
RGKKSRPSAVPS
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggaggacgcggaatccttgggcttcgaacacatggggcttgacccccgacttctgcag
gcggtctccgacctgggctggtctcgacccacgctcatccaggagaaggctatcccgctg
gccctggacggcaaggacctcctggcccgggcccgcaccggctcggggaagacagcggcg
tacgccctgcccatgctgcagttgctgcttcacgggaagacgacaggtcctgtggtagaa
caggctgtgagaggccttgttctcgtgcctaccaaggagctggctcggcaagcccagtcc
atgatccagcagctggctacctactgtgctcgggacatccgtgtggccaacgtctcagct
gctgaagatgcagcttcacagagagctgtactgatggagaagccagacatcgtggtgggt
actccatcccgcatattaagccacttgcagcgagacagtttgaaactacgtgactccatg
gagctactggtggtggatgaggctgatcttcttttttcctttggctttgaggaagaactc
aagagtctcctctgtcacttgccccggatctaccaggcttttctcatgtcggctactttt
aatgaggatgttcaggcactcaaggagctggtgctacataatccggttaccctcaagtta
caggaatcccagctgccagggccagaccaattacagcagtttcaggtgatctgtgaaact
gaggaggacaaattactgctgctctttttttttctgctgctctatgccctgcttaaactg
tccttggttcggggcaagtccttgctcttcgtcaatactctggagcggagctaccggcta
cgcctgttcctggagcagttcagcatcccctcctgcgtgctcaatggagagctcccactg
cgctccaggtgccacatcatctctcagttcaatcaaggcttctacgactgtgtcatagcc
actgatgctgaagtcctgggagctccagtcaagggcaagcgacagggccgaggccccaaa
gcaaacaaagcctctgaccctgaggcaggtgtggcccggggcatcgacttccaccatgta
tctgccgtgctcaactttgaccttccccctacccctgaggcctacatccaccgagctggc
aggactgcacgtgccaacaacccaggcacagttttgaccttcgtgctgcctgtggagcgg
ccccacttgaacaagattgaggagcttctcggtggagagaacagggccccagtcctgctt
ccataccagttccggatggaggagattgaaggctttcgttatcgctgtagggatgctatg
cgctctgtaactaaacaggccattagggaggcccgactgaaggagatcaaggaggagcta
ctacactcagagaagctcaagacatactttgaagacaaccccagagacctgcagctgctg
cggcacgacctgcctttgcatcccgcagtggtaaagccccacctgggccatgtccccgag
tacctggttcctcctgctcttcgtggccttgtgcgccctcacaagaagcggaaaaagcca
tcctcctgtaggaagaccaagaaggtgaagacccagaacccactgcgcagcttcaagcac
agaggaaagaagtccagaccctcagcagtgccctcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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