KEGG   Tupaia chinensis (Chinese tree shrew): 102501687
Entry
102501687         CDS       T02978                                 
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102501687 (POLR1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tup03021]
    102501687 (POLR1A)
Enzymes [BR:tup01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     102501687 (POLR1A)
Transcription machinery [BR:tup03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     102501687 (POLR1A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 102501687
NCBI-ProteinID: XP_006168445
Position
Un
AA seq 1714 aa
MLGSKNVPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNHCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLAVGALQAVYELERILNRFLEENADPSAFEIQEELEQYTAKIVQNNLLGSQGAH
VKNVCESRSNLIAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKAVQKET
EPAAPGIEEAQLGKRGYLTPTSAREHLLAIWKNEGFFLNHLFLGLDDVGMESRFNPSMFF
LDFLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDIVLIRKLLALMAQEQKLPREVAAL
TTDEEKDSSIVMDRSFLSALPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQAVINGPGVHPGAAMVINEDGSRTALSAVDVTQREAVAKQLLTPATGAPKPQGTKIV
CRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHF
PQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTIRGCFFTREQYMELVY
RGLTDKVGRVKLFPPAILKPFALWTGKQVVSTLLINIIPEDHIPLNLTGKAKISGKAWVK
DAPRPVPGFDPNSMCESQVVIRKGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVL
TCLARLFTAYLQLYRGFTLGVEDILVKSKADVRRHRIIEESTLCGPRAVRAALNLPEAAS
CDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTG
INPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL
YGEDGLDIPKTQFLQPKQFPFLASNYEVIVKSKHLHEVLSRADPQKALHHFRAIKKWQSR
HPSTLLRRGAFLSYSQKVQAAVRALNLEGENRNGRSPETQQMLRMWYELDGQSQRKYQKK
AAPCPDPCLSTCRPDIYLGSVSETFERKVDDYSQEWAAQAEQSYEKSELSLDRLKTLLQL
KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAN
IKTPMMSVPVLNTRKALRRVKSLRKQLTRVCLGEVLEKIDVQESFCMGEKQDKFRVYQLH
FQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMESIRKKNSKASAFRNVNTRRATQQDLD
NAEESGRIRGEQEGGEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESAEEEETVGE
ENDDEDGQEEGSVRGEGAHKAPEQEEDMGSGPEEDSPQKPSRIRGPQGAEAVERRVQAVC
EAHPYIAHYQYDTEESLWCEVTVKLPLMKINFDMTSLVVSLAHSTVVYATKGITRCLLNE
TTNSKNEKEFVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRVIEKEIK
DVFAVYGIVVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATM
MGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq 5145 nt   +upstreamnt  +downstreamnt
atgttgggctccaagaacgtgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaacccgcggtacctggac
agcctggggaacccatcagcaaacggcctgtatgatttagctttgggtcctgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcaaccactgctctgggcacctgggccac
atcgagctcccactcaccgtgtacaaccctctcctcttcgataaactctacctgctgctc
cgaggctcttgcttgaactgccacatgctgacctgtccccgggctgtgattcacctctta
gtgtgccagctgagggttctggcagttggggccctacaagcagtctacgagttggagcga
attctgaacaggtttctggaagaaaatgctgatccttctgctttcgaaatccaggaagag
ttagaacaatacacagccaaaattgtgcagaacaacctgctggggtctcagggtgcacac
gtgaagaatgtgtgtgagagcaggagcaacctcattgctcacttctggaagacacacatg
gctgccaagcgatgtccccattgcaagactgggcggtcagttgtccgaaaggagcacaac
agcaaactgacgatcacgtatccagccatggtgcacaggaaagctgtccagaaagagaca
gagcctgcagctccgggaattgaggaagcacagttgggaaaacgagggtacttgacaccc
accagtgcccgagaacatttgcttgccatctggaagaatgaaggattcttcctgaatcac
ctttttttgggactggatgatgttggcatggagtccagattcaatcccagcatgttcttt
ctagacttcttggtggtgccaccctcaagatatcgccctgtcaatcgcctgggggaccag
atgtttactaatggccagacggtgaatttgcaggctgtcatgaaggacatagttctgatc
cgaaagcttctggcactgatggcccaggaacagaagctgccgcgtgaggttgcagcgctc
accacagatgaggaaaaagattcctcgattgtcatggaccgatcctttctaagtgccctt
ccaggccagtccctcacagacaagctttacaacatttggattcgtctccagagccatgtc
aatatcgtgttcgacagtgaaatggacaaactgatgatggaaaagtaccctggcattagg
cagatcctggagaagaaggaaggtctgttccgaaagcacatgatgggaaagcgcgtggac
tacgcggcccgctcggtcatctgcccagacatgtacatcaacaccaacgagattgggatt
cccatggtgtttgctacaaagctgacctaccctcagccagttaccccctggaacgttcag
gaactgaggcaggcagtcatcaatggccccggtgtgcacccaggagcagccatggtcatc
aacgaggacggcagccgcacagccctgagtgctgtggacgtgacccagcgggaagccgtg
gccaagcagctcctgactccagccacaggggcaccaaagccccaggggacaaagattgta
tgccggcacgtgaagaatggggacattctcctactgaaccgacagcccaccctgcacaga
ccctccatccaggcccatcgtgcccgtatcctgcctgaagagaaagtcctgcggctccac
tatgccaactgcaaggcctataacgctgacttcgatggagacgagatgaacgcccacttc
ccccagagtgaactgggccgggccgaggcctatgtcctggcctgcaccgatcagcagtac
cttgttcccaaagatggccagccattggcaggattgatccaggaccacatggtttcaggt
gcaagcatgactattcgaggttgctttttcacccgggaacaatatatggaactggtttac
cgaggactcacagacaaagtggggcgcgtgaaactctttcctcctgccatcctgaagccc
tttgcattgtggacaggaaaacaggtggtgtcaacactgctcataaacataatcccagag
gaccacatcccactgaacttaactggaaaggcgaaaatcagcgggaaagcctgggtgaag
gatgctcctcggcccgtccccggctttgaccccaactccatgtgcgagtctcaggtggtc
atccggaaaggggagctgctctgcggggtgctggacaaggcgcactacgggagctccgcc
tacggcctggtccactgctgctatgagatctacggcggcgagaccagcggcaaggttctc
acctgcctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggc
gtggaagacattttggttaagtcaaaggcagatgtcaggagacacaggatcatcgaagaa
tccaccctctgtgggccccgggccgtcagggctgccttaaacctgccagaagccgcatca
tgtgatgaggtccgagggaaatggcaggatgcccatctgggcaaagaccaaagggatttt
aacatgattgatctgaagttcaaggaggaagtgaaccattatagcaatgagattaataag
gcatgcatgccctttggcctgcacagacagttcccagagaacaacctgcagatgatggtg
cagtcgggagccaaaggttccaccgtgaacacgatgcagatctcatgcctgcttggccag
attgaactggaaggtcggagacccccgctcatggcatctggcaagtcactgccctgcttc
gaaccctatgaattcacccctagggctggcggctttgtcactggcagattcctcaccggc
atcaaccctcctgagttcttctttcactgcatggcagggcgagagggcctggtcgacacc
gctgtgaaaactagccgctccggctacctccaaaggtgcatcatcaagcacctggagggg
ctggtcgtccagtacgacctgaccgtccgcgacagcgatggcagcgtggtgcagttcctg
tacggggaagatggcttggacatccccaagacacagttcctgcagcccaagcagttcccc
ttcctggccagcaactacgaggttatagtaaaatcgaagcatctccatgaagtcttatcc
agagcagatccccaaaaagctctgcaccatttcagagccatcaaaaaatggcagagcagg
caccccagcaccctgctgagaagaggcgccttcctgagttactcccagaaagtccaggca
gctgtgagagccttgaacctcgagggcgagaaccggaatggccgcagccccgagactcag
cagatgttgaggatgtggtatgagttagatgggcagagccaaaggaaataccagaagaag
gccgctccttgtcccgacccctgtctgtccacctgccgcccagacatctacttagggtcg
gtgtcagaaacgtttgaaagaaaggttgatgactacagtcaagagtgggcagctcaagca
gagcaaagttacgagaaatccgagctttctctggacaggttgaagaccctgctgcagctg
aagtggcagcgctcactttgtgacccgggcgaggccgtgggcctgctggccgcccagagc
attggggagccctccacacagatgaccctgaacaccttccacttcgcaggccgaggcgag
atgaatgtcaccctgggcattccgaggctgcgggagattctcatggtggccagtgccaac
atcaagacgcccatgatgagtgtgcccgtgctcaacaccaggaaagccctgaggagggtg
aagagcctgaggaagcagctcaccagggtgtgcttaggggaggtgttggagaagattgat
gtccaggagtccttctgtatgggagagaaacaggacaaattccgggtgtaccagctgcac
tttcagttcctgccacacgcgtattaccagcaggagaagtgtctgaggcccgaggacatc
ctgcacttcatggaaacaaggttctttaaacttctgatggagtccatcagaaagaagaac
agtaaagcatcagccttcagaaatgtgaacacccgaagagctacccagcaggatttggac
aacgctgaggagtcagggaggattcggggcgagcaggaaggcggtgaggaagaagagggg
cacatcgtagacgccgaagctgaggagggggacgctgatgcttctgatgccaaacgcaag
gagaagcaagaggaggaggtcgattacgagagcgcagaggaggaggagacggtgggcgag
gagaatgacgatgaggacggacaggaagaaggcagcgtccgtggtgaaggcgcccacaag
gccccagagcaagaggaggacatgggctcaggccctgaagaggactcaccccagaagccc
tcccgcatccgggggccccagggagctgaggccgtggagcgccgggtccaggccgtgtgc
gaggcccacccgtacatagcacactaccagtacgacaccgaggagagcctgtggtgtgag
gtaacagtgaagctccctctaatgaagattaactttgacatgacctccctggtcgtgtcc
ttggcccacagcaccgtcgtctacgcgaccaagggcatcactcggtgcctcctgaatgaa
acaaccaacagtaagaacgagaaggagtttgtgctgaacacggaaggcatcaacctcccg
gagctgttcaagtatgccgaggtgctggatctgcgccgcctctattccaacgacatccac
gcgatggccaacacgtacggaatcgaagccgcactgcgggtgatcgagaaggagatcaag
gacgtgttcgccgtgtatggcattgtggtcgatcctcgccacctctccctggtcgctgac
tatatgtgcttcgagggtgtctacaagcctctgaatcgctttgggatccggtcaaactcg
tcccctctgcagcagatgacgtttgaaaccagcttccagtttctgaagcaggccaccatg
atgggatcccatgatgagctgaggtccccttcagcctgcctcgtggtggggaaggtcgtc
aagggcgggacaggcctgttcgagctcaagcagcccctgcgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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