KEGG   Tetranychus urticae (two-spotted spider mite): 107362605
Entry
107362605         CDS       T04901                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03015  mRNA surveillance pathway
tut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107362605
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107362605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tut03019]
    107362605
   03041 Spliceosome [BR:tut03041]
    107362605
Messenger RNA biogenesis [BR:tut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107362605
   mRNA cycle factors
    Stress granule specific factors
     107362605
Spliceosome [BR:tut03041]
 Complex C
  Other components
   Complex C specific factors
    107362605
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 107362605
NCBI-ProteinID: XP_015785189
UniProt: T1KB83
Position
Unknown
AA seq 708 aa
MNNPAGPSYPMASLYVGDLAPDVTEAQLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNF
QQPPDAERALDTMNFDVINGKPIRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKVMYDTF
STFGNILSCKVAVDEEGNSRGYGFVHFENEESALNAIAKVNSMLLNGKKVFVGRFVPRKE
REKIIGEKSKRFTNIYVKNFGEEIDTDEKLKDMFSPFGNVVSCKVMTDDNGKGKGFGFVS
FEEPEQAEKAVDDLNGKELPGGKTLYVGRAQKKAERQAELKRRFEQLKMERLNRYQGVNL
YVKNLDDTIDDERLRKEFSPFGTITSAKVMTDSNGRSKGFGFVCFSAPEEATKAVTEMNN
RIVGSKPLYVALAQRKDERKVHLITQHMQRVGGGIRMPPIPNPASAAAAAHPHAHHPHHH
HPNLAPAAAMFPNHAAAMASIGALGNAGPQAGHQGAPQPGYYIPTMAPHQMQQRGSYYQP
QGGPSAPGPQQARNPRWPGAQQMPRGAPQPYNQALRARGPAMAAGQGPRPTQVPTSSGPA
GSRPITGGAQSMPQGMGPRGAPRGVPPSSVRAANAGQAAMGSYKFNSQIRNPPPVQMAPQ
ANMGAQQVQPQSDVQSAVHVQGQEPLTASMLANASEAEQKQMLGERLFPLIHDLYPELAG
KITGMLLDIDNSELLHMLEHHESLRAKVEEAVAVLQAHQAKELAAIKK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgaacaatcctgctggaccaagctacccaatggcctccctatatgttggtgatttagcc
ccagatgttactgaggctcaactgtttgaaaaattttcgagtgctggaccagtcctgtct
atacgagtgtgtcgggatatgattactcgacgatcgcttggctatgcctatgtcaacttc
caacaacctccggatgctgaaagagcactggacactatgaattttgatgtcatcaacgga
aaacccatacgtatcatgtggtctcaaagagatccttcccttcgtaaatctggtgtggga
aacattttcataaaaaatcttgacaaatccattgataataaggttatgtacgacacattt
tccactttcggaaacattttatcatgtaaagttgctgttgatgaggaaggcaactcacga
ggttatggtttcgtccattttgaaaacgaagaatcagctctaaacgctattgctaaagta
aactctatgttgcttaatggaaaaaaagtatttgtcggacgtttcgtacctagaaaagag
agagaaaagattattggtgagaaatctaaaagattcaccaacatttatgttaaaaacttt
ggcgaagaaattgacaccgatgaaaaattgaaggacatgttctcacctttcggtaacgtt
gtttcttgcaaagttatgactgacgacaatggcaaaggcaaaggatttggttttgtcagc
tttgaagaaccggaacaagcggagaaggccgttgatgatttaaatggaaaagaattgcca
gggggcaaaacactctatgttgggcgagctcaaaagaaggcggagagacaagctgagctt
aaacgtagatttgaacaactcaaaatggaaagactgaatcggtatcaaggagtaaatctt
tatgtaaagaatctcgatgataccattgacgatgaacggctccgaaaggaattttcacct
ttcggtacaataactagtgccaaggttatgactgactctaatggtagaagcaaaggtttc
ggtttcgtatgtttttctgctccagaagaagccacgaaggctgttaccgaaatgaacaat
cggattgtcggatctaaacctctctatgtagctttggcacaaagaaaagatgagagaaaa
gttcacctcattacacaacacatgcaaagagttggtggaggaatcagaatgccaccaatt
cctaatccagcttcagctgcagctgcagctcatcctcatgcccatcaccctcaccatcat
caccctaacttggcgccagctgctgctatgttccccaaccatgcagcagccatggcttct
atcggagctcttggtaatgctggtccccaagcaggacatcaaggagcacctcagcctggt
tactacatcccaaccatggctccacatcaaatgcaacagcgtggctcctactatcaacca
caaggcggtccctcagcccctggacctcaacaagcgcgaaatccaagatggcctggtgct
caacaaatgccacgtggtgctccacaaccttacaatcaagccttgcgagctcgaggtcca
gctatggctgctggtcaagggcctcgaccaacacaagtcccaacatcatctggtccagcc
ggatctagacctattaccggaggtgctcaatctatgcctcaaggtatgggacctcgtgga
gcacctcgaggtgtaccaccatcttccgtccgggctgctaatgctggacaagctgctatg
ggcagctataaatttaattctcaaatccgtaacccgccacctgtccaaatggctcctcag
gctaacatgggagcacaacaagttcaaccacaatcagatgttcaatcagcggtccatgta
caaggacaagaaccactcactgcttctatgctggctaacgcatcagaagctgaacaaaaa
caaatgctgggtgagcgactcttcccgctaattcatgatctttacccagagctggccgga
aagatcactggtatgcttttggacattgacaattcagagctacttcacatgttggaacat
catgagtcattacgagctaaagtggaagaagccgttgctgttttgcaagctcatcaggcc
aaggagttggctgcaataaagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (195)   
   KEGG ORTHOLOGY (1)   
   RefGene (191)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (213)   

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