KEGG   Tetranychus urticae (two-spotted spider mite): 107365681
Entry
107365681         CDS       T04901                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03030  DNA replication
tut03410  Base excision repair
tut03420  Nucleotide excision repair
tut03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107365681
   03410 Base excision repair
    107365681
   03420 Nucleotide excision repair
    107365681
   03430 Mismatch repair
    107365681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tut03032]
    107365681
   03036 Chromosome and associated proteins [BR:tut03036]
    107365681
   03400 DNA repair and recombination proteins [BR:tut03400]
    107365681
DNA replication proteins [BR:tut03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107365681
  DNA Replication Termination Factors
   ELG1-RFC complex
    107365681
Chromosome and associated proteins [BR:tut03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107365681
DNA repair and recombination proteins [BR:tut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107365681
  Check point factors
   HRAD17(Rad24)-RFC complex
    107365681
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 AAA_22 AAA_16 DNA_pol3_delta AAA_11 FtsK_SpoIIIE AAA_30 SLFN-g3_helicase T2SSE AAA_19 PBECR3
Other DBs
NCBI-GeneID: 107365681
NCBI-ProteinID: XP_015788722
UniProt: T1KMG2
Position
Unknown
AA seq 354 aa
MALWCDRYRPTSLNKLDYNKEQADYLKRMIKSNDFPHLLVYGAPGSGKRTRVQCILREIY
GPGVDKTRIEHLTIETPSNKKLELNSIASNYHIEVNPSDIGIQDRLVVQDVMKNIAQSGG
LVDKVPFKVIVISEAHKLSKDAQHSLRRTMEKYISTLRLIMVADTSSTILPPIKSRCLLL
RVAAPSTDKISQILEFVAKKENFDISPSLIQKIAKESERNLRRALLMMETMYINQSKDII
KPSYVLYIQRMAKKMVENPSLEKVKDIREDFYELEQHLIPVDLIFKVLIHSLLQICDKHL
RGKLIQLASHYEHQMRVGSKRVLHFEAFVAHFMAAYQKFTEDNMIDDDDDLLAM
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggctttgtggtgtgatagatatcgaccaaccagtttaaacaagttggactacaacaaa
gaacaagctgattatttgaaacgtatgattaaaagtaatgactttcctcatcttcttgtc
tatggtgcaccaggatccggcaaaagaactcgagtccaatgtattcttagagaaatttat
ggccctggggtggataaaacacgcatcgagcatttaacaattgaaacaccttctaataaa
aaacttgaactcaattcaattgccagtaattatcatattgaagttaatccaagtgatatt
ggtatccaagatcgtctagttgtgcaagatgttatgaaaaatattgctcaaagtggaggt
ctcgtggataaagtacctttcaaagtaattgttatttcggaggcgcataaattgtctaag
gatgctcaacactctctccgaaggaccatggaaaagtatatttctaccttgaggctaata
atggtcgctgatacgagttcaactattctacctcctataaaaagtcggtgtttgttacta
cgtgtagctgctccttcaaccgacaaaataagtcaaatactcgaattcgtcgcaaagaaa
gaaaattttgacatatctcctagcctcatccagaaaattgccaaagaatctgaaagaaat
ttgcgacgtgcattgttaatgatggaaacaatgtacatcaatcaaagtaaagacatcatt
aaaccatcatatgtcctttatattcagcgaatggctaaaaaaatggttgaaaatccctcc
ctggaaaaagttaaagatattagagaagatttttatgaacttgaacaacatctaattcca
gtggacttaattttcaaggtgctcattcattcattgctacagatttgtgataaacatttg
aggggtaaacttatccaactggcatcacattatgaacatcaaatgagagtgggaagtaaa
cgagttttacattttgaagcctttgtcgctcatttcatggctgcctaccaaaagttcacg
gaagataatatgattgatgatgatgatgatctgctagcaatgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (13)   
   Pfam (13)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system