KEGG   Thermoproteus uzoniensis: TUZN_0478
Entry
TUZN_0478         CDS       T01460                                 
Name
(GenBank) exosome complex exonuclease Rrp41
  KO
K11600  exosome complex component RRP41
Organism
tuz  Thermoproteus uzoniensis
Pathway
tuz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tuz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TUZN_0478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tuz03019]
    TUZN_0478
Messenger RNA biogenesis [BR:tuz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TUZN_0478
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     TUZN_0478
SSDB
Motif
Pfam: RNase_PH RNase_PH_C CNDH2_N
Other DBs
NCBI-ProteinID: AEA11974
UniProt: F2L3B5
Position
complement(416140..416877)
AA seq 245 aa
MKQPPVPLLVEGRRADGRTPDQMREVKISVGVISNADGSAMVSYGNTTAVAAVYGPREMH
PRHLSLPDRAVMRVRYHMAPFSTRDERKNPAPSRREIEISKVLREALEPAIFLEQFPRSR
IDVFVEIVQADGSTRVASLTAASLALADAGVPMRDLVIGVSVGLVNGTVVLDLNGLEDNY
GEGDMPVGYMPNLGRITLLQLDGSWSRDKFAEALKLAIKGAEYVYSKAREALKTKYFEIA
EEVAK
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaagcaaccgcctgtgcctctgctggtagaaggcaggagggctgacgggaggacgcca
gaccagatgcgtgaggtcaagatatctgtcggcgtcatctccaacgccgacggctccgcc
atggtgtcctacggcaataccacggccgttgctgcagtatacggcccgcgcgagatgcac
ccgaggcacttgtccctgccggatcgcgccgtcatgcgcgtgaggtaccacatggcgccc
ttcagtactagggacgagcgcaagaacccggcgccgtcgcgccgcgagatagagatctcg
aaggtgttgagggaggcgcttgagcccgcgatatttctggagcagttcccgcgttcccgt
atagacgtattcgtcgagatagtccaggcagacggatccacgcgggtggcctcgttgacc
gcggcgtctctcgcgctcgccgacgccggcgtgcccatgagggatttagtgataggcgta
tcggtcggcctagtcaacggcaccgtcgtgttggatcttaacgggcttgaggacaactac
ggcgagggcgatatgccggtcggatatatgccgaacctaggccggataaccctcttacag
ctcgacggctcgtggagtagggataagttcgccgaggccttaaaactcgccataaagggg
gccgaatacgtctacagcaaggcgcgcgaggcgctcaagacaaaatactttgaaatagcc
gaggaggtggctaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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