KEGG   Thermoplasma volcanium: TVG0998758
Entry
TVG0998758        CDS       T00042                                 
Symbol
TVG0998758
Name
(GenBank) cell cycle control protein 48
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tvo  Thermoplasma volcanium
Brite
KEGG Orthology (KO) [BR:tvo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvo03019]
    TVG0998758 (TVG0998758)
   03009 Ribosome biogenesis [BR:tvo03009]
    TVG0998758 (TVG0998758)
   04131 Membrane trafficking [BR:tvo04131]
    TVG0998758 (TVG0998758)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvo04147]
    TVG0998758 (TVG0998758)
Messenger RNA biogenesis [BR:tvo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     TVG0998758 (TVG0998758)
Ribosome biogenesis [BR:tvo03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    TVG0998758 (TVG0998758)
Membrane trafficking [BR:tvo04131]
 SNARE
  SNARE associated proteins
   Others
    TVG0998758 (TVG0998758)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    TVG0998758 (TVG0998758)
Exosome [BR:tvo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TVG0998758 (TVG0998758)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_2 AAA_14 CDC48_2 AAA_5 TIP49 AAA_22 AAA_33 nSTAND3 AAA_18 RNA_helicase IstB_IS21 AAA_28 AAA_17 Mg_chelatase AAA_24 AAA_7 Sigma54_activat AAA_3 SLFN-g3_helicase ABC_tran AAA_19 Zeta_toxin TsaE DUF815 Parvo_NS1 PhoH Sigma54_activ_2
Other DBs
NCBI-ProteinID: BAB60117
UniProt: Q97A35
Position
996521..998758
AA seq 745 aa
MDNSSGIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIEKARKTVGRVYRARPE
DENKGIVRIDSVMRNNCGASIGDKVRVRKVRTEIAKKVTLAPIIRKDQRLKFGEGIEEYV
QRALIRRPMLEQDNISVPGLTLAGQTGLLFKVVKTMPGKVPVEIGEETKIEIREEPASEV
LEEVSRVSYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI
ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKRE
EVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDR
NGRKEILMIHTRNMPLGMDEEQKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPE
IDLDKPIPTEILEKMVVTEEDFKNALKNIEPSSLREVMVEVPNVHWDDIGGLEDVKREVK
ETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSK
WVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIE
VMNGVVAIGATNRPDIMDPALLRAGRFDKLIYIPPPDKDARLSILKVHTKNMPLAPDVDL
DSIAQRTEGYVGADLENLCREAGMNAYRENPDATQVSQKNFIDALKTIRPSIDEEVIKFY
KSISETMGKSVSEKRKELQDQGLYL
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggataacagcagcggtataatactcagggttgccgaggcaaactcaacagatccaggc
atgtctagggttaggcttgatgaatcgtctaggcgcctgctcgatgccgagatcggcgat
gtagtagagatcgagaaggccagaaaaactgtaggcagggtatacagggccaggccggag
gacgagaacaaggggatagtaaggatagacagtgtaatgaggaataactgcggcgcttcc
ataggggataaggtaagggtcagaaaagtaaggacagagatagccaagaaagtaacgctt
gcacccataatacgtaaagatcaacgcttaaaatttggcgaaggcatagaggaatacgtc
caaagggcgcttataagaaggccaatgctcgaacaggacaacataagcgtcccaggttta
acgcttgcaggccaaaccggacttttatttaaggttgtaaaaactatgcctggcaaggta
ccagttgaaatcggagaagagacaaagatagagataagggaggaacctgcctctgaagta
ttggaggaggtatctagggttagttatgaagatataggaggtctctcagaacagctgggc
aagatcagggagatgatcgagcttccattaaagcatcctgaactattcgaaaggctgggc
attacacctccaaagggtgttatactatatgggcctcctggaactggaaaaacccttatt
gctagagctgttgcaaatgaatctggggccaatttcctgtccataaacggaccggagata
atgagtaagtactatgggcagagcgagcaaaagctgagagagatattctcaaaggcagaa
gaaacagccccatctataatattcatagatgaaatagattcgattgcacccaagagggaa
gaggtacagggggaggtcgaaagaagagtagttgcacaactccttactttgatggacggt
atgaaggaacgcggtcacgtaatagtcataggtgcaaccaacaggatagacgcagtggat
ccagcgctgagaaggccaggaaggttcgacagagagatcgaaataggagttccagaccgc
aatggcagaaaggaaatcttaatgatacataccagaaacatgcctctaggcatggacgag
gagcagaaaaacaagttccttgaggaaatggctgactacacctatggatttgtaggagct
gatcttgccgccctcgtaagggagagtgcaatgaacgccctaaggaggtatctaccggaa
atcgacctagataagccgatacctacagaaatattggaaaaaatggttgttactgaagaa
gactttaagaatgcattgaagaacattgaaccaagcagcctcagagaggtaatggtcgaa
gtgcctaacgtacactgggatgacataggcggtctcgaagatgttaagagggaggtaaag
gaaactgtagaattgccgcttctaaagccagatgtgtttaagagattaggaataaggccg
tcgaaaggtttcttgttatacggtccgcccggagttggaaagacgctgttggccaaggcg
gttgccacagagagcaacgctaactttatatctattaagggcccggaggtattaagcaag
tgggtaggagagagcgagaaggctataagggaaatattcaagaaagcaaagcaagtcgcc
cctgctatagtattcctcgatgaaatagattctatagcgccaaggagaggtacgacaagc
gactcaggcgtcactgaaaggatagttaatcaactcctaacatcgctcgatggcatagag
gttatgaacggagttgtagccattggggccacgaataggccggatataatggatccagca
ctgcttagggctggaagatttgataaacttatctacataccgccaccggacaaggacgca
cgcctcagcatattaaaggtacataccaaaaatatgccgctcgcgccggatgtcgatctg
gacagcattgcccaaaggacagagggctacgtgggtgcagaccttgagaacctatgcagg
gaagcaggtatgaatgcctatcgagagaacccagatgcaactcaggtttcacagaagaac
tttattgatgcccttaagactataaggccatccatagatgaagaagtaataaagttctac
aagagcatcagcgaaaccatgggcaaatcggtatcggaaaagaggaaggagcttcaggat
cagggactgtatctgtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (42)   

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