KEGG   Trametes versicolor: TRAVEDRAFT_116241
Entry
TRAVEDRAFT_116241 CDS       T04795                                 
Name
(RefSeq) RuvB-like helicase 1
  KO
K04499  RuvB-like protein 1 [EC:5.6.2.4]
Organism
tvs  Trametes versicolor
Pathway
tvs03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TRAVEDRAFT_116241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvs03036]
    TRAVEDRAFT_116241
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tvs03037]
    TRAVEDRAFT_116241
Enzymes [BR:tvs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TRAVEDRAFT_116241
Chromosome and associated proteins [BR:tvs03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     TRAVEDRAFT_116241
  Chromatin remodeling factors
   SRCAP complex
    TRAVEDRAFT_116241
   INO80 complex
    TRAVEDRAFT_116241
   INO80 complex (yeast)
    TRAVEDRAFT_116241
   SWR1 complex
    TRAVEDRAFT_116241
   ASTRA complex
    TRAVEDRAFT_116241
Cilium and associated proteins [BR:tvs03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   TRAVEDRAFT_116241
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N AAA_22 AAA_16 AAA_5 bpMoxR AAA_19 AAA_28 IstB_IS21 Mg_chelatase AAA_18 AAA_25 AAA_7 AAA_33 Parvo_NS1 ResIII nSTAND3 AAA_30 Zeta_toxin Rad17 RNA_helicase
Other DBs
NCBI-GeneID: 19407360
NCBI-ProteinID: XP_008035968
JGI: 116241
Position
Unknown
AA seq 474 aa
MKASTAGASSSAPVAHNAVPPPPTASATRSSRIAPHSHIKGLGLNAEGYAASDGAGFIGQ
TEAREACGVVVDLVKSRKFSGRALLLVGPPGTGKTALALAISQELGAKVPFCPMVGSEVY
STEVKKTEVLAEAFRRAIGLRIKETKEVYEGEVTELTPTESENPLSGYGKTVSHVVIGLK
TVRGTKQLRLDPSIYEAILKEKIQVGDVIYVEQNTGAVKRVGRSDAYASSYDLESETYVP
LPKGDVHKRKELVQDVTLGDLDAANARPQGGQDIMSVMGSLVKSGRTEITEKLRREVNRV
VKGYVDQGVAEVVPGVVFIDEVHMLDIECFTYLNALLESPMAPTVVLATNRGNALVRGTT
DIYAPHGIPVDLLDRCLIVRTAPYEKDAIAKVVQLRANVEGLKLGDGVLERLAQKGHDSS
LRYALQLLTPASILASISGRKEIQLEDIDEMGELFLDAKTSADIISKHQSSEVS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaaagcatcgaccgcgggagcttcgtcctctgcaccagttgcgcacaatgcggtaccc
ccaccacctaccgcgtctgctacgcgctcttctcggattgccccacactcgcatatcaag
ggccttgggctgaatgctgaaggatacgccgcgtcggatggcgctgggttcattgggcag
actgaggcgcgcgaggcttgtggcgtggtcgtcgacctcgtcaagtcgcgcaaattctcc
gggcgcgcgctgctccttgtcggtccccccggaacaggaaagacagctctcgctctggct
atctctcaggagctgggcgcgaaggtgccgttctgtcccatggtcggttcggaggtgtac
agtacggaggtgaaaaagacggaagtccttgctgaggcgttccggcgcgcgattggtctt
cggataaaggagaccaaggaggtgtatgaaggagaggttacggagctgacgcccacggag
tcggaaaaccctcttagcgggtacggcaaaaccgtctcgcacgtagtcattggactcaaa
accgtccgcgggacgaagcagctgagactcgacccgagcatatacgaggccatcctgaag
gagaagatccaggtgggagacgtcatttatgtcgagcaaaatacgggcgcggtgaagcgc
gtgggtcgctcggacgcgtacgcctcctcgtacgacttggagtccgagacatatgtccct
ctgcccaagggcgacgtgcacaagcgcaaggagctcgtacaagacgtgacgctgggagac
cttgatgctgcaaacgcgcggccacaggggggacaggatatcatgagtgtgatgggtagt
ctggtgaagagcggtcgaactgagatcacggagaagcttcgtcgagaagtgaaccgtgtg
gtgaagggttacgttgaccaaggcgttgcggaggtcgtcccgggtgtggtattcatcgac
gaggtccacatgctggatatcgagtgcttcacttacctaaacgcgctcctggagtctcct
atggcaccaacggtagtactcgctaccaatcgcggaaacgctctggttcgtggtactacg
gacatctacgccccgcatggtattcctgtggatttgcttgaccggtgtctcatcgtgaga
accgcaccatacgagaaggatgcgattgccaaggttgttcaattgcgcgccaacgtggag
ggcctcaagctcggcgacggcgttctcgaacgcctagcccagaaagggcacgacagctca
ctaagatatgcactgcaactgctcacgcccgcgtcgatcctcgcgtcaatttctgggcgc
aaggagatccagctcgaagacatcgacgagatgggcgagcttttcttggatgccaagacg
agcgcagacatcatcagcaagcaccaaagcagcgaggtgtcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system