KEGG   Trametes versicolor: TRAVEDRAFT_70437
Entry
TRAVEDRAFT_70437  CDS       T04795                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
tvs  Trametes versicolor
Pathway
tvs03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRAVEDRAFT_70437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvs03021]
    TRAVEDRAFT_70437
Enzymes [BR:tvs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TRAVEDRAFT_70437
Transcription machinery [BR:tvs03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     TRAVEDRAFT_70437
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF2786 DUF1317
Other DBs
NCBI-GeneID: 19419299
NCBI-ProteinID: XP_008035936
JGI: 70437
Position
Unknown
AA seq 1403 aa
MKEPVSHQAPKVIKALQFSLLNNQDTVKLAEFEVTHRDLYTPIDRLPVKNGVLDRRLGTT
EKSAFCETCGLNSVDCVGHYAYIKLVVPVFHIGYFKHTIGILQCICKTCARVLLEEPDRR
SYLKRFRRPNLENLQRMTLVKSVNALARKTVYCPYCAATNGTVKKAGALKIIHDKFRAKK
TAEEMEKWKRTFAPAIEAQKELGMYVNKAIHEDLNPLKVLDLFKRISDEDCELLGLRPEY
GRPEQYIWQYISVPPVAIRPSVAQDGASNEDDLTVKLTEIVFSNALIKQGLVKGAPTAQF
MEQWEFLQLSVAMYINSELPGVPSQLGQKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRT
VISPDPNLRIDEVAVPERVAKILTYPERVTGHNIDRLKKAVRNGCDVHPGANYVTAGSNG
FKKYLKFGNRTAIADGLRIGDIVERHVIDGDIALFNRQPSLHKLSIMCHRIKVRPWRSFR
LNECVCGPYNADFDGDEMNLHVPQTEEARTEALELMSVKHNLVTPRNGEPVIAAIQDFIT
ASFLLSRRDTFFDRRQFTQICSYFADADLQIDIPPPAIWKPVRLWTGKQVFNVLMRPNRQ
SKVFVNVESKCNKEDKPQAACYPRMRPAPDLSPNDGWLVIVNSEIMCGVMDKATVGSGKK
KSVFGVIMRDYGPHEAAAAMNRVAKLCARYLANIGFSLGINDVIPGPVLSGKKDSMVEDA
YAACERLIIRAKKGLLENKPGCDQEQTLEAEISKVLSDVRGNVGEICMKELSRHNAPLIM
ATCGSKGSVINVSQMVACVGQQIIAGHRVPDGFQDRSLPHFPKKSRDPPSKGFVRNSFYT
GLTPTEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLVTHYDSSVRNAVGGVVQF
RYGDDGLDPACLEGDAQPVDYERAWRHACSLASRAPRGLLPYEIIEFVDHELSTRKYTTE
CTAAYLATIRSFISENIAQRLGEVRKRHGMFEALEREDEWDADTDLTMGASDADKAAVDN
KIKVTEEQLRLFLDVCWTKYVKAKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMN
VTLGVPRIKEIINAAKAISTPIISCKLVAYDSEASARIVKGRLERTHVGDIASVLEEAWA
PEYTYIGVIVDMKTIQDLQLELTLDDIKWAIVGARKLKIKQESITVIPRKNRLRIYVDGA
DKYYRLRELKRALPDVVVKGVPTIRRAIINIKENNDHRGKKGDKELLVEGYGLQKVMTTQ
GIVGEQTTSNHVIEIAQVLGIEAARRTIINEIQYTMQSHGMSIDPRHVMLLGDVMSYKGE
VLGITRFGVAKMKDSVLMLASFEKTTDHLFDASAYGKTDSIAGVSESIIMGNPAAMTGTS
MPALITPAPSISKPRKLLFEGAL
NT seq 4212 nt   +upstreamnt  +downstreamnt
atgaaggagcccgtgtcccaccaggcacccaaagtcatcaaagcacttcagttcagcttg
ctcaataaccaggacacggtcaagcttgccgaattcgaggtcacccatcgcgatctatac
acccccatcgaccgcctgcccgttaagaatggtgtgcttgatcgtcgtttaggaacgaca
gagaaaagcgccttctgcgagacttgcggcctgaactcggtggactgtgtgggacactat
gcatacatcaagctggtcgtccccgtcttccatatcggctacttcaagcacaccataggc
atactgcaatgcatttgcaagacatgtgcgagggtgctgctcgaagagcccgaccgtcgc
tcttacctcaaacgcttccgaagacccaacctcgaaaacctgcagaggatgacactcgtc
aagtccgtcaacgcgctcgcccgcaagacggtatactgtccatactgtgcagctacgaac
ggaaccgtcaagaaggcaggcgccttaaagatcatacacgacaagttccgcgcgaagaaa
actgccgaggagatggagaagtggaagaggaccttcgctcctgcaatagaggcccagaag
gagttgggcatgtacgtcaacaaggcgatccacgaagacctgaaccctctgaaggttctt
gacttgttcaaacgtatctctgacgaagactgtgaactccttggacttcgaccggagtac
ggtcggccagagcagtacatctggcagtacatttccgtccctcccgtggcgattcggccg
tcggtagcacaagacggcgcctcgaacgaggatgatctcaccgtcaagcttactgaaatc
gtgttcagcaacgcgctgatcaagcagggtctcgtcaaaggtgctcctaccgcacagttc
atggaacaatgggagttcctccagctctccgtcgccatgtacatcaactccgagcttccc
ggcgtgccatcacaactcggccagaaacccatccgagggttctgccagcgtctgaagggc
aaacagggacgcttccgtggtaacttgtccggaaagcgtgtcgacttctccggccgtacc
gtcatctcccccgacccgaacctccgcatcgacgaggtcgccgtgccagaacgggtcgcg
aagattctcacataccccgaacgcgttactgggcacaacatagaccggctgaagaaggcg
gtgcgaaatgggtgcgatgtccatccaggcgcaaactacgtgactgcggggagcaatggc
ttcaagaagtacttgaagtttggtaaccggacagccatcgcggatggccttcgtataggc
gacatcgtggaacggcacgtcattgacggtgacattgcactgttcaatcgacaacccagt
ttgcacaagctctctatcatgtgtcataggatcaaagttcgaccatggagatcattccgt
ctcaacgagtgtgtttgcggtccttacaacgctgatttcgatggagacgagatgaacctt
cacgtcccgcaaacagaagaggcgcgcacggaagccctcgagcttatgagcgtgaaacac
aacctcgtcaccccacgaaacggcgaacccgtgatcgccgccatccaggacttcatcacc
gcctctttcctcctctcccggcgcgacaccttcttcgaccggcggcagttcacgcagatc
tgctcctacttcgcggacgcggacctgcagatcgacatccccccgcccgcgatctggaag
cccgtgcggctctggacgggcaagcaggtcttcaacgtgctcatgcgcccgaacaggcag
tcgaaggtgttcgtgaacgtcgagagcaagtgcaacaaggaggacaagccgcaggcggcg
tgctacccgcgcatgcggcctgccccggacttgtcgcccaatgacggctggctggtgatc
gtgaacagcgagatcatgtgtggcgtcatggacaaggcgacggtgggcagcgggaagaag
aagtcggtgtttggtgtcattatgcgcgactatggcccgcatgaggcagccgcagcgatg
aacagggtagcgaagctctgcgcacggtatcttgctaacatcgggttttctctcggtatc
aacgacgtcattcccggacctgttctgtcgggcaagaaggatagcatggttgaagacgca
tacgctgcctgcgagaggctaattatccgggcaaagaagggtctactggagaacaagccc
ggttgcgaccaggagcaaactcttgaagcggaaatctccaaggtgctgtccgacgtccgt
ggaaatgtaggagaaatctgcatgaaagagctgagccgccacaacgctcccttgatcatg
gcaacgtgtggttccaaaggttccgtcatcaacgtctcccagatggttgcctgtgtcgga
cagcaaattattgccggtcatcgtgtacccgacggtttccaggaccgctcgctgccccac
ttccccaagaagtcgcgcgacccgccgtcgaagggcttcgtgaggaacagcttctacaca
ggcctcacccctacagagttccttttccacgccatctcgggtcgcgaaggtctagtcgac
accgccgtcaagactgctgagacgggctacatgcagcgacgacttatgaaggcgctggag
gatctcgtcacgcattacgactcgtccgtgcgcaacgccgtcggtggagtggtgcagttc
cgatatggtgacgacggcctcgacccagcatgtctcgagggtgacgctcagcctgtggac
tatgagcgagcatggcgacacgcctgctcccttgcttccagggctccccgtggtctgcta
ccgtacgagattatcgagttcgtcgatcacgagctctcgacacgcaagtacaccaccgaa
tgcacagcagcgtatctcgcgacgattcgcagcttcatctccgagaacatcgcacaacgg
ctcggggaagtgcgcaagcggcacggcatgttcgaagcgctggagcgcgaggacgagtgg
gacgccgataccgacttgacaatgggtgcatcagacgccgacaaggccgccgtcgacaac
aagatcaaggtgaccgaggagcagctgcggctgttcctcgacgtttgctggacgaagtac
gtcaaggcgaagatcgagcccgggtccaccgtcggcgccgtcggcgcacagtccatcggc
gagcccggcacgcagatgacgctgaagacgttccatttcgcgggtgtcgcgtccatgaac
gtcacgctcggggtgccgcgcatcaaggagatcatcaacgctgcgaaggccattagcacg
cccattatcagttgcaagctcgttgcgtacgacagcgaggcttctgcgcggatcgtgaag
gggcggctggagcgcacgcacgtcggagatatcgcatccgtcctcgaggaggcgtgggct
ccagagtacacctacatcggcgtgatagtcgacatgaagaccattcaagatcttcaactc
gagctcacgctggacgacatcaaatgggccatcgtaggcgcgcggaaactcaagatcaag
caagagtccatcaccgtcatcccgcgcaagaaccgcctgcgtatatacgtagatggggcc
gacaagtattatcgcctgcgcgagctcaagcgggcgttgcccgacgtcgttgtgaagggt
gtgcccactatcaggcgtgctatcatcaacatcaaggagaacaacgaccacaggggcaaa
aagggtgacaaggagctgctcgtggaaggctatggcttgcagaaggtcatgaccacccaa
ggtattgttggcgagcaaacgacctccaaccacgtcatcgagatcgcgcaggtcctcggg
attgaggctgcgcggcgaacgatcatcaacgagattcagtataccatgcagagtcacggc
atgagtatcgatccgcggcacgtcatgctgcttggggacgtcatgtcctacaagggcgaa
gtcctcggtatcacgcgcttcggtgtagcgaagatgaaggacagcgtgctcatgttggct
tcgtttgagaagacgacagatcatctgttcgatgcgtctgcgtacggaaagacggacagc
attgctggcgtgtccgagagtatcattatgggcaaccccgctgcaatgacgggtacctcg
atgcccgcgctcattactcctgcgccgtcaataagcaaaccaagaaaattgttgttcgag
ggggctttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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