KEGG   Candidatus Uzinura diaspidicola: ASNER_229
Entry
ASNER_229         CDS       T02439                                 
Symbol
dnaE
Name
(GenBank) bifunctional DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
udi  Candidatus Uzinura diaspidicola
Pathway
udi03030  DNA replication
udi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:udi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ASNER_229 (dnaE)
   03430 Mismatch repair
    ASNER_229 (dnaE)
   03440 Homologous recombination
    ASNER_229 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:udi03032]
    ASNER_229 (dnaE)
   03400 DNA repair and recombination proteins [BR:udi03400]
    ASNER_229 (dnaE)
Enzymes [BR:udi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ASNER_229 (dnaE)
DNA replication proteins [BR:udi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ASNER_229 (dnaE)
DNA repair and recombination proteins [BR:udi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ASNER_229 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon HHH_3 SLBP_RNA_bind
Other DBs
NCBI-ProteinID: AGC66983
UniProt: L7VN51
Position
213271..216699
AA seq 1142 aa
MSAVGITDYGNMMGAFSFLNTIETYNQNILNTCNKLKGVIGCELFVSVDSSKKPLTKNQQ
DQRWKQVFLAKNKNGYHNLVKLCSEGYINGYSSGFPRVEKELILQYQKDLIALTGDLSAE
IPYTILNYGKRRAEEVFKWWHEKFSGDFYVELLRHGLKEQNYVNKVLLQFSQKYGVKYIP
QNNTFYLEKKDANAHDILLCVRDGEKQSAQIGIGRGYRFGFSRQEYYFKTQDQMMTSFSD
VPESFDYLDELMEKISIFSLSREILLPKFSIPKEFQSSGSLEDGGKRGENSYLYHLAFQG
AYQHYGAISPSIKERLVFELSTIEKTRFPGYFLIVQNFVSEARRMGVSVGPGRGSVAGSL
VAYCVGITQIDPIQYNLLFERFLNTDRVSLPDIDLDLDDRGRESIVKWVVNKYGNKQVAK
IITYGMMAAKSSIRDTARVLDLSLENADSIAKMMPEGVSLKNLLSMNVTQLRKKFYGHDL
ENGVKLLLIAKDNLLEGKVLRQACILEGLLRCIGVHACGVIITPSDITNYIPIAISKDSD
LLLTQFDNNVVESAGLLKIDLLGLKTLTIINDTVELVEKRHGLIIHEYPLDDLKTYQVFQ
KGETIAIFQYESIGMQRYLRKLKPDSFEDLIAMNALYRPGPIQYIPNFIARKHGKEPIVY
VLPEMKEFLSSTYGITVYQEQVMLLAQKLAGFTKGQADILRKAMGKKQKHILDKIKSKFI
YGAVRKGFPKNILEKIWKDWETFASYAFNKSHSTCYAYLAFQTAYLKTHYTYEFMAAVLS
NHIHNIKDISFFMAECRRLGLSVIGPDINESQQLFLVNEKGNIRFGFKAIKGIGEAVVDS
IIRERSKNGPYKSVLDLIKRIDSHIINKKSIESLVLSGAFDRFEPIHRAQYFYKERGYNM
IEKIILKKKKKAPLFYDRDFFFPYCNPWLNIVKLEKEKQTVGIYISSHPLYDYRLEIYAI
HGISLEDFNRNEDLWIGKSSVFLYGMVLRSESKMSIKKGKKDGFFTLEDYKNIRDFYIFG
DAYMKFSHLLTANTFLAIKVFLDRYKNGVIRINFLQILHLGEVFNLLNKELHIEIEVYKL
DHKMIDYIENTISKYKGNGTLKIFLLDRKENICMPSRKYDVHLDKRLFMELEKIQGLNLQ
LK
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgtctgcagtaggtattaccgactatggtaatatgatgggagctttttcttttctaaat
accatagaaacttataaccagaatattttaaatacgtgtaataagctaaagggagtcatt
ggttgtgagttatttgtttcagtggattcgtcaaaaaaacctttaactaaaaatcaacaa
gatcaacgttggaaacaggtgtttcttgcaaaaaataaaaatggttatcataatttagtt
aaattatgttctgaaggctatattaatggatattcttctggttttccaagagtagaaaaa
gaactaatattacaatatcaaaaggatttgattgctcttaccggtgatttaagtgcagaa
attccttatacaatacttaattatggaaaaagaagagccgaggaagtttttaagtggtgg
catgagaaattctcaggtgatttttacgtagaacttttgagacatgggcttaaagagcag
aattatgtaaataaagtgttattacaattttctcaaaagtatggagtaaaatacattcct
caaaacaatactttttatctagagaagaaagatgcaaacgcccacgatattttactttgt
gttcgtgatggagaaaagcaatctgctcaaattggaataggcagaggttatcgttttggg
tttagtaggcaagaatattattttaaaacgcaagaccaaatgatgacgtctttttctgat
gttcccgagtcttttgattatttagatgaacttatggaaaaaatcagtattttttctcta
agcagagaaatcttattgcctaaattttctattccaaaagaattccaatcttctggatct
ctagaagatggaggaaaacgtggggaaaattcttatttatatcatctggcttttcaagga
gcttatcaacattatggagcaatttctccctctattaaagaacgtttggtttttgagtta
tctacgatagaaaaaactaggtttcctggttattttcttatagtacaaaattttgtttcg
gaagctagaaggatgggtgtatcggtagggcctggaagaggatcagtagcaggatcttta
gtagcctattgcgtaggaattacacagatagaccccattcaatacaatttgcttttcgag
cgatttttaaatacagatcgcgtttctttaccagatatcgatctggatttagatgataga
ggtcgtgaaagtatcgtaaaatgggtcgtcaataaatatggtaataaacaagtagctaaa
ataataacgtacggcatgatggctgctaaatcttcaataagagatacagcaagagtgtta
gatctttctttggagaatgctgatagtatagctaagatgatgccagagggggtttctctt
aaaaatcttctttctatgaacgtaactcaactaaggaaaaaattttatggacatgactta
gaaaatggagtaaaattgctactaattgctaaggacaacttacttgaaggcaaagtttta
cgacaagcatgcattcttgaaggattattgcgatgtataggagtgcatgcttgtggagta
attattactccttcagatattactaattatattcctatagcaatttcgaaagattcagat
ctattgcttactcaatttgacaacaatgtagtagaaagtgctggattgcttaaaatagac
ttattaggattaaaaacacttactattattaatgatacagtagaattggttgagaaaaga
catggactcattatacatgagtaccctctagatgatttaaaaacttatcaagtttttcaa
aaaggagaaactatagcaatttttcaatatgaatctattggtatgcaacgttatctacga
aagctaaagccagattcttttgaagaccttattgccatgaatgccctttatcgccccgga
cctatacaatatatacctaatttcattgcacgaaaacatggtaaagagcctattgtttat
gttcttccagagatgaaagaatttctaagtagtacatatggaataactgtctatcaagaa
caggtaatgttattagctcaaaaattggccggctttaccaaaggtcaagccgatattttg
cgaaaagcaatgggaaaaaaacaaaagcatatactagataaaattaaaagtaagtttatc
tatggagctgttagaaaagggtttccaaaaaatatattagaaaaaatatggaaagactgg
gaaacttttgcttcttatgcctttaataagtcgcattctacctgttatgcttacttagca
tttcaaaccgcatacttaaaaacgcattatacatatgaatttatggcagctgttttaagt
aatcatattcataacataaaggatataagtttttttatggcagaatgtagacgtttagga
ttgagtgtgatcggaccagatattaatgaaagccaacaattatttttagtaaatgaaaag
ggaaatatacgttttggatttaaagctatcaaaggaattggtgaagcagttgtagattct
attattagagaacgttcaaaaaatggtccttataaatctgttttagatttaattaaacgt
attgattcacatataataaataaaaaatcaatagagtctttagttttatcaggagctttc
gatagatttgaacctattcatcgtgcccaatacttttataaagaaagagggtacaatatg
attgaaaaaatcattttaaaaaagaaaaaaaaggctcctcttttttatgatagagatttc
ttttttccttattgtaacccctggttaaacatagttaaacttgaaaaggaaaaacaaaca
gtaggcatttacataagttctcatccgttgtatgactatagattagaaatatatgcgata
catggcatatctttagaagatttcaatagaaacgaagatttatggataggaaagagtagt
gtatttctttatggaatggttctaagatcagaaagtaaaatgtcaataaaaaaaggaaaa
aaagatgggttttttacattggaggactataaaaatataagagatttttacatctttgga
gatgcatatatgaagttttctcatctgcttactgctaatacttttttagctataaaggtt
tttttagatcgttataaaaatggagttattcgtattaactttttacaaatccttcattta
ggtgaagtattcaatctactaaataaagaacttcatatagaaatagaagtttataagcta
gatcataaaatgattgactacattgaaaatactatatcaaaatataaaggcaacggaaca
ttaaaaatatttttattagatagaaaagaaaatatatgtatgccatcaagaaaatacgat
gtacaccttgataagagattatttatggaactagaaaaaatacaaggattaaatcttcaa
ttaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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