KEGG   Ustilago maydis: UMAG_00920
Entry
UMAG_00920        CDS       T01021                                 
Name
(RefSeq) putative DNA replication factor C subunit protein
  KO
K10756  replication factor C subunit 3/5
Organism
uma  Ustilago maydis
Pathway
uma03030  DNA replication
uma03410  Base excision repair
uma03420  Nucleotide excision repair
uma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UMAG_00920
   03410 Base excision repair
    UMAG_00920
   03420 Nucleotide excision repair
    UMAG_00920
   03430 Mismatch repair
    UMAG_00920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:uma03032]
    UMAG_00920
   03036 Chromosome and associated proteins [BR:uma03036]
    UMAG_00920
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_00920
DNA replication proteins [BR:uma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    UMAG_00920
  DNA Replication Termination Factors
   ELG1-RFC complex
    UMAG_00920
Chromosome and associated proteins [BR:uma03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    UMAG_00920
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     UMAG_00920
  Check point factors
   HRAD17(Rad24)-RFC complex
    UMAG_00920
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA_22 AAA Rad17 DNA_pol3_delta Rep_fac_C AAA_24 AAA_11 AAA_16 ATPase_2 AAA_assoc_2 Rpr2 Clenterotox
Other DBs
NCBI-GeneID: 23562083
NCBI-ProteinID: XP_011386927
UniProt: A0A0D1CD13
Position
2:305609..306767
AA seq 353 aa
MLFVDKYRPKALSELHYHQDLSKRLSSLADHEDFPHMLMYGPSGAGKKTRIACLLRQLYG
PGTYKLKIDQRVFVTPSNRKIDVNIVSSNYHIELTPSDAGNYDRLVIQDILKEIAQTQNV
DLNAKHRFKVVVINEADSLSRDAQSALRRTMEKYMGNLRLVLCATSTSKIIGPIRSRCLL
LRVGAPTDEEIKTVLNHVAKKERFNIPDAVQTQICDDCNGNLRKAMLVLEALRMQSPDLS
GGIGIAKPDWEIYITKTADLILSDPSPQNLLAVRSKLYELLVHAIPPTLILKHLTDNLVK
KVDAQVKAAIVQKAAFYELRTRTGSKVIFHLEAFVAAVMHIQKSFLLGMTWDD
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgctgttcgtcgacaagtaccgaccgaaagcgctctccgagctgcactaccaccaagat
ctctctaagcggctctcatcgttggcagaccatgaagatttcccacacatgctcatgtac
ggtccatcaggagctggcaaaaagactcgcattgcctgtctccttcgccaactctacggt
cccggcacttacaagctcaagatcgatcagagagtatttgtgacgccttcgaatcgcaag
atcgacgttaatattgtctcatccaactaccacattgaattgacgccttcggatgcgggc
aactacgatcgattggtgatccaggacatcttgaaggagattgcacagacgcaaaatgtg
gatttgaacgccaaacataggttcaaggtggtagtgatcaatgaagccgactcgttaagt
agggatgcacagagtgcgttgaggaggactatggagaagtacatgggcaatttgaggtta
gtcttgtgcgcgacaagcacgagcaaaattatcggtccaattcgatcacgttgtctgttg
ctccgagtcggtgcgccaacagatgaagagatcaaaacggtactcaaccacgtagcgaaa
aaggaacgcttcaacatccccgatgctgtgcaaacccaaatttgcgacgactgcaatggc
aatcttcgaaaagctatgctcgtactcgaagctctccggatgcaatcgcccgatctatcc
ggtggtatcggtattgccaaaccggattgggagatctatattacgaaaaccgccgacctg
atcctctcggatccatcaccacaaaacctgctcgctgtacgatccaagctctacgagctc
ctcgtgcacgccattcccccaacgctcatcctcaagcatctcaccgataatctggtcaag
aaggtcgatgcgcaggtaaaagccgccatcgtccagaaggccgcgttttatgagctgagg
acgaggacaggtagcaaggtcatctttcatttagaagcgtttgttgccgcagtgatgcat
attcagaagagcttcttgttgggcatgacgtgggatgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (50)   

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