KEGG   Ursus maritimus (polar bear): 103663097
Entry
103663097         CDS       T03271                                 
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
umr  Ursus maritimus (polar bear)
Brite
KEGG Orthology (KO) [BR:umr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:umr03036]
    103663097 (HFM1)
Enzymes [BR:umr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103663097 (HFM1)
Chromosome and associated proteins [BR:umr03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    103663097 (HFM1)
SSDB
Motif
Pfam: Sec63 DEAD Helicase_C ResIII AAA_22 Hfq
Other DBs
NCBI-GeneID: 103663097
NCBI-ProteinID: XP_040482984
UniProt: A0A8M1FRF9
Position
Unknown
AA seq 1440 aa
MLKSNDSLFSLDTLFFEKWDEAENYPDNEKSLDWFLPPAPLISEIPDTQALEEEIRSHKL
LGQEERPKILPSDLKITNENTNYISPTQKFQFAFSSNEYEAGDLNLGVAGNNDLSHVPGK
LTYGSSQKYKNQIGTEIAPEKSVPDNTKLVNFAEDKGESTPAFRKRLFKISDNIHEDVNS
NDSTNLDYPIGSMKIAPTEMNKGEPWKCSSSKQKHQYSDINLFTASSTFSASEIREDIFK
APTFSLASQPHEVQGVIENDLDSLKAVTEIPAIFRSIFKEFPYFNYVQSKAFDDLLYTDR
NFVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPI
GLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVK
DENRGPTLEVVVSRMKTVQSLSPTSENSSTIIPLRFVAVSATIPNAEDIAEWLSDGERPA
VCLKMDERHRPVKLRKVVLGFPCRSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATR
KGVQQAASVLVKDAKFIMAVEQKQRLQKCAYSIRDSKLRDILIHGVAYHHAGMELSDRKV
VEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGR
PQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALE
WIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIRMDEDINFKP
TEAGRLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFVDVQLRINEKKTLNTLNK
DPNRVTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRNGSRITRWLSD
FVAVQEKKFAVLLNSLILAKCFRCKLWENSLHISKQLEKIGITLSNAMVNAGLTSFKKIE
ETDARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTIILRNFEQL
QTKRTAPDSHYVTLIIGDADNQLVFKHRIMDSVLLKAGNWTKKIDVKRAFKSEDLCINLI
SSEYVGLDIQQKFTVFYLGPKRLGNQIIMQKKSETEISHSKHSNRSTIAGPNIGMTACKK
PGNRECNHHCKNKHTCGHDCCKTGVAQKSEIKEPTISSYLSDLRSRNAVSSLPPVKRLKM
QMNKSQSVDLKEFGFTPKPSLPSISRSECLNIPELSIMEQRDQHEICAEVQQEPSEYQNK
EVLNVNFELGDEVWDDFDDENLLEVASFSASTEKTKTSGFGNTLSSSTGGSKLFLQESKS
KFQGETAKSFVPSHEKPDIYLSNSPVFKFDTSSMKKLPQQAGNASIVHLQERKQQSLSPE
IEKLCFTHSKKIPNSSHFVKKVDFFIRNSECKEDIDFSRYHPDDEADEMKSFLGIFDDIF
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgctgaaatcaaatgattccttgttttctttggatactttgttttttgaaaaatgggat
gaagctgaaaactatccagacaatgaaaaatcactggattggtttctcccacctgctccg
ttgatttcagaaattccagatactcaggcattagaggaggaaataagaagtcataaactg
ttaggtcaggaagagaggccaaaaatattaccatcagatttaaagataactaatgaaaac
acaaattatatttcaccaacacaaaaattccagtttgccttttcctcaaatgaatatgaa
gcaggtgatcttaatttaggagtagcaggtaacaatgacttatcacatgttcctggcaag
ctgacatatggttcttctcagaaatacaaaaatcagattggcactgagatagcacctgag
aaaagtgttccagataatacaaaattagttaattttgcagaagacaaaggagagagcaca
ccagccttccggaaaagattatttaaaatatctgacaatatacatgaggatgttaattct
aatgacagtacaaacttagactatcctattggctcaatgaaaattgccccaacagaaatg
aacaaaggggagccatggaaatgtagcagtagtaagcagaaacatcaatattcagacatt
aacctatttacagcaagcagtactttttctgcttctgaaatcagagaagacatattcaaa
gcaccaactttttcacttgcatcccagcctcatgaagttcaaggggtaatagaaaatgat
ttagattccttgaaggctgtcacagaaatcccggcaatatttagaagtattttcaaggaa
ttcccatatttcaactatgtacagtccaaagcctttgatgatcttctttacacagatagg
aattttgtgatttgtgctccaactggttctgggaaaactgtagtgtttgaactggctata
acaagattattaatggaagtcccattgccatggtcaaacattaaaattgtttacatggca
ccaataaaggccctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaata
ggactgaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcag
catgcccatattattatgacaactccagaaaaatgggatagcatgactagaaaatggaga
gacaactctttggtccagctggttagactctttctcattgatgaggtacatgttgtaaaa
gatgaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtacagtct
ttatctcctacttctgaaaatagcagcacaattattccattgagatttgtagctgtatct
gcaacaattccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcg
gtatgtctgaaaatggatgaaagacataggccagtgaaacttcggaaagtggttcttgga
tttccctgcagaagtaaccaaaccgaatttaagtttgatttaaccctcaactacaaaatt
gccagtgttatacaaacgtactctgatcagaaacccacacttgtgttttgtgcaacaagg
aaaggtgtgcaacaggctgcttctgttcttgtgaaagatgctaaatttattatggctgtg
gaacagaaacagaggttacagaagtgtgcatattccataagagattcaaaactgagagat
atcttaatacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagta
gttgaaggagctttcactgttggagatctaccagttctttttactaccagtactttagct
atgggagtaaatttgcctgctcacctagtagttataaaatctacaatgcattatgctgga
ggaatgtttgaggagtacagtgaaacagatattctacagatgattggtagagctggtcga
cctcaatttgacactacagctactgcagttattatgactcgattaagtacaaaagagaag
tatattcagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatt
gaacatttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaa
tggatacgatcaactttgctttatatcagagctttgaaaaatccatctcattatggtttt
gcatctggattgaacaaagatggaattgaagcaaaattacaagagttatgtttgaagaat
ctgaatgatttatcatctctggacttgataaggatggatgaagatattaatttcaaacca
actgaggcaggaagattgatggcttggtattacatcacatttgagacagtgaagaaattt
tgtaccatcagtggaaaagagactttattagatctggtcacaatgatagccagctgcaag
gaatttgtagatgtgcagttaaggataaatgaaaagaaaacactgaatactttgaacaaa
gatccaaatcgggtaactatcagatttccaatggaaggaagaattaaaacaagagaaatg
aaagtaaattgtcttattcaggctcagctaggatgcattcccatacaagactttgctttg
acacaagataccgcgaagattttcagaaacggttcacgaattacaagatggttgtcagat
tttgtggctgttcaagaaaagaagtttgctgtactattgaacagcttgattttagctaaa
tgttttagatgcaaactttgggaaaactctctacatatatccaaacagctggaaaaaatt
ggtataacattgtcaaatgcaatggtaaatgcaggtttgacctcctttaaaaaaatagaa
gaaacagacgcaagggaacttgaactgattttaaatagacaccccccttttggaacgcaa
ataaaagaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaaga
tatagtgataccatggcggaaatattagtgaccattatattaagaaactttgaacagcta
caaactaaaagaacagcaccagattctcactatgttaccttaatcataggtgatgcagat
aatcagctggtttttaagcacagaattatggattctgttttgctaaaagctggaaattgg
actaaaaagattgatgtgaagagagcttttaaatctgaagatctttgcataaatctaatt
agttctgaatatgttggacttgatattcagcagaaatttacagtcttttacttaggaccc
aagaggcttggaaatcaaataattatgcaaaaaaaatcagaaactgagatttcccattct
aaacattcaaacagatctacgatagcaggacccaatataggaatgactgcttgcaaaaaa
cctgggaaccgagaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgc
tgtaaaactggagttgcacaaaagtcagaaattaaagagccaacaatctcttcatatcta
tccgatttaagaagcaggaatgctgtttcatcacttcctccagttaaacgtctcaagatg
caaatgaataaatctcaaagtgtggaccttaaagaatttggttttactccaaagccttct
cttcccagtatatcaagatcagagtgcttaaacatacctgaattgtctataatggagcag
agggatcagcatgaaatctgtgcagaagttcaacaagaaccatcagaatatcaaaacaaa
gaagttttgaatgtgaactttgaattgggagatgaagtttgggatgattttgatgatgag
aacttattagaagttgccagtttttcagccagtactgagaagacaaaaacttcaggattt
ggaaacactttgagttcaagtacggggggaagtaagctattcctccaagagtcaaagagc
aaattccaaggagaaacggcaaaaagttttgttccatcacatgagaagccagatatttat
ttatcaaattctcctgtgttcaagtttgatacatcatccatgaagaaattacctcaacaa
gctggaaatgcaagtattgtccatttacaagaaagaaaacaacaaagtctgtcaccagaa
attgaaaaactgtgctttactcactctaaaaaaataccaaattcttcacattttgttaag
aaagtggatttctttattagaaacagtgaatgtaaagaggacattgatttcagtaggtat
catcctgatgatgaagctgatgaaatgaagtcttttctgggaatatttgatgatattttc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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