ID A0A023Y6X6_9GAMM Unreviewed; 335 AA.
AC A0A023Y6X6;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=Isocitrate dehydrogenase {ECO:0000313|EMBL:AHY60090.1};
DE EC=1.1.1.41 {ECO:0000313|EMBL:AHY60090.1};
GN ORFNames=DX03_15715 {ECO:0000313|EMBL:AHY60090.1}, SrhCFBP13529_13795
GN {ECO:0000313|EMBL:TKK05569.1};
OS Stenotrophomonas rhizophila.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas.
OX NCBI_TaxID=216778 {ECO:0000313|EMBL:AHY60090.1, ECO:0000313|Proteomes:UP000025222};
RN [1] {ECO:0000313|EMBL:AHY60090.1, ECO:0000313|Proteomes:UP000025222}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14405 {ECO:0000313|Proteomes:UP000025222}, and DSM14405
RC {ECO:0000313|EMBL:AHY60090.1};
RA Alavi P., Starcher M.R., Thallinger G., Zachow C., Mueller H., Berg G.;
RT "Is there a border between beneficial and pathogenic bacteria?";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:TKK05569.1, ECO:0000313|Proteomes:UP000305310}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFBP13529 {ECO:0000313|EMBL:TKK05569.1,
RC ECO:0000313|Proteomes:UP000305310};
RX PubMed=31040301; DOI=.1038/s41598-019-42865-9;
RA Torres-Cortes G., Garcia B.J., Compant S., Rezki S., Jones P., Preveaux A.,
RA Briand M., Roulet A., Bouchez O., Jacobson D., Barret M.;
RT "Differences in resource use lead to coexistence of seed-transmitted
RT microbial populations.";
RL Sci. Rep. 9:6648-6648(2019).
CC -!- SIMILARITY: Belongs to the isocitrate and isopropylmalate
CC dehydrogenases family. {ECO:0000256|ARBA:ARBA00007769}.
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DR EMBL; CP007597; AHY60090.1; -; Genomic_DNA.
DR EMBL; QGAK01000003; TKK05569.1; -; Genomic_DNA.
DR RefSeq; WP_038690170.1; NZ_QGAK01000003.1.
DR AlphaFoldDB; A0A023Y6X6; -.
DR STRING; 216778.DX03_15715; -.
DR GeneID; 61477361; -.
DR HOGENOM; CLU_031953_0_1_6; -.
DR OrthoDB; 9806254at2; -.
DR Proteomes; UP000025222; Chromosome.
DR Proteomes; UP000305310; Unassembled WGS sequence.
DR GO; GO:0004449; F:isocitrate dehydrogenase (NAD+) activity; IEA:UniProtKB-EC.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0051287; F:NAD binding; IEA:InterPro.
DR Gene3D; 3.40.718.10; Isopropylmalate Dehydrogenase; 1.
DR InterPro; IPR019818; IsoCit/isopropylmalate_DH_CS.
DR InterPro; IPR024084; IsoPropMal-DH-like_dom.
DR PANTHER; PTHR11835; DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE; 1.
DR PANTHER; PTHR11835:SF34; ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT ALPHA, MITOCHONDRIAL; 1.
DR Pfam; PF00180; Iso_dh; 1.
DR SMART; SM01329; Iso_dh; 1.
DR SUPFAM; SSF53659; Isocitrate/Isopropylmalate dehydrogenase-like; 1.
DR PROSITE; PS00470; IDH_IMDH; 1.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000313|EMBL:AHY60090.1}.
FT DOMAIN 4..331
FT /note="Isopropylmalate dehydrogenase-like"
FT /evidence="ECO:0000259|SMART:SM01329"
SQ SEQUENCE 335 AA; 35488 MW; 5FE69F3D2B3CD031 CRC64;
MTQKITVIRG DGIGPEIMDA TLFVLGKLDT GFEYEDADAG LVALEKHGDL MPASTLESIA
RNKIALKSPL TTPVGGGFTS INVSLRRHFD LYANVRPAVS FPNTKSRFGD GVDLITVREN
TEGAYLAEGQ EVSADGETAF SGTRITRKGS ERIVRYAFEL ARSTGRKKVT AVHKANIIKS
TSGLFLAVAR EVAAKYPDIE FQEMIVDNCC MQLVMRPEQF DIIVTTNLFG DIISDLCAGL
VGGLGLAPGA NIGENAAIFE AVHGTAPDIA GQGKANPCAL LLAAAQMLDH VGQTDNAERL
RKAIVATLEA KDSLTGDLGG TGNTMGFAQA IASRL
//