ID A0A059A0P6_EUCGR Unreviewed; 1803 AA.
AC A0A059A0P6;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Homeobox domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUGRSUZ_K01058 {ECO:0000313|EMBL:KCW47261.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW47261.1};
RN [1] {ECO:0000313|EMBL:KCW47261.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf extractions {ECO:0000313|EMBL:KCW47261.1};
RA Schmutz J., Hayes R., Myburg A., Tuskan G., Grattapaglia D., Rokhsar D.S.;
RT "The genome of Eucalyptus grandis.";
RL Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR EMBL; KK198763; KCW47261.1; -; Genomic_DNA.
DR RefSeq; XP_010035800.1; XM_010037498.2.
DR STRING; 71139.A0A059A0P6; -.
DR EnsemblPlants; KCW47261; KCW47261; EUGRSUZ_K01058.
DR GeneID; 104424949; -.
DR Gramene; KCW47261; KCW47261; EUGRSUZ_K01058.
DR KEGG; egr:104424949; -.
DR eggNOG; ENOG502QQYM; Eukaryota.
DR InParanoid; A0A059A0P6; -.
DR OMA; RIFFECR; -.
DR OrthoDB; 394285at2759; -.
DR GO; GO:0031010; C:ISWI-type complex; IEA:EnsemblPlants.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IEA:EnsemblPlants.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:EnsemblPlants.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0010228; P:vegetative to reproductive phase transition of meristem; IEA:EnsemblPlants.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR PANTHER; PTHR36968:SF5; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 51..111
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 578..637
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 762..831
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT DNA_BIND 53..112
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 104..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 326..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..884
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 906..933
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 954..982
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1553..1803
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 378..505
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 40..64
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 858..884
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 908..922
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1601..1623
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1624..1640
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1641..1661
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1734..1760
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1768..1782
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1803 AA; 200235 MW; 33366DA4E375AA13 CRC64;
MEEEEVAAAA AGPSSSGGGA AAGGGGGGGA GSGGDGGGGG GDAEKKKTAE GEGKSKRKMK
TASQLEILEK TYAVEPYPSE AIRTELSGQL GLSDRQLQMW FCHRRLKDRK GPSKRQRKDS
PAAAAPEPMS VGGEAANELP YGAVAGSSSF APAVDPWRAA PRVGTAVARI SGDYPVIKRH
YEPEPSMAER HAIAFVEAQL GEPLREDGPI LGMEFDPLPP GAFGTPIGGA VMGQHKQTGR
SFEAKYERSD AKSIKGVVRP VHEYQFLPEK PTVRAETYER VVPPYHGGSD GSNPRISAGP
PFLHANEPMP SGYGLQNRMP TLSLLTPPGK QGHLLTSTPG EYDLDPSKTS STNLEIENRL
GAHSASALDN PIVSSDRRVI HNEELLRAER KRKSEEARIQ REVEAHEKRI RKELKKQDIL
RRKREEQVRK EMERLDRERR KEEERLLREK QREVERYQRE QRRELERREK FLQKESRRAE
KQRRKEQARR EKEAARLKAA NERAIARRMA KESVELIEDE QLELMEFAAS SKELPSIMSL
DFETLQNLEL YRDSMTAFPS ISVQMKRPFA IQPWSHSEEN IGNLLMAWRF VITFADVLGL
WPFTLDEFVQ AFHDYDARLL GEIHVSLLRT IIKDIEDVAR TPSTNVGANL NSVANPGGGH
PHIVEGAYSW GFDIRTWQRQ LNPLTWPEIL RQFVLSAGFG PQLKKKNVEA AYIHEDHEGQ
GNDGQDIISI LRNGAAAENA FAKMQQRGFS NLRRSRHRLT PGTVKFAAFH VLSLEGDDGL
SILEVADRIQ KCGLRDLTTS KTPEASVAAA LSRDTKLFER TAPSTYCVRP AYRKDPVDAE
AILSAARERI REFKTELVDE EEADDAERDE DSESESTEDP EVDDLNAELN AQVEVSQRDV
DLLGVKTLSG DGKDDADEID ISQNGMERAN GDSSLMCPED LIKDEDASVP VDRGDGGIQD
EVTDNQQDTD IDESNPGEPW VQGLMEGEYS DLSVEERLNA LVAIIGVAIE GNSIRSVLEE
RLEAATALKK QMWAEAQLDK RRTKEDYLMK IHHPLQMASK TEANVPNISS AEGKLSPLLA
VDGGNNEMPV DPAIQRESMM VQQNPSPLIT SEGNVHVQDI PGGSENFSLQ QVGYAAEMSR
SQLKSYIGYK AEELYVYRSL PLGQDRRRNR YWQFVTSNSR NDPGCGRIFV ELHDGRWRLI
DSEEGFNSLL ASLDVRGVRE SYLHFMLQRI ESSFKESVRR NAICTGGKRT SEEKVKREAL
EVPHGSDASI GIDSPSSSVC GVDPETSETS TSFEIELGRN RHEKDGALKR YQEFENWIWK
ECLSPSVLYA IKYGKERCVP LLNACDRCHE INSMDYDNCP SCCWTSTTSK NDLYLSESAA
PSEHKLHMLP DPTKHGSVSS PVKTRLLKVL LALVEAFVPP EALESVWTDD YRKSWGMKLR
TSSSTSDLLQ ALTLLESAIR RDYLAPNFET TNELLSISSG FASDISVSLE ALIVLPWIPQ
TTAAVALRLM EFDSAISYSL HQKAESAVDE GSGDFVKFPS RYMGTRSWHN HDSAATPFRG
GPVDENWADP GPALARSGRR RGRGTGRGLS RTGGRRSQRR IPGGPRFDSG KKARVANGER
GRSRGRGGRR RGRRSTRNRQ RAVKKEVPVF DERDDTKELM MEESPGVLIE DGWNGDDGNN
VGLNLEEAEN SSSSESSEFE DEDGQATGSY RYDLAADDYS GGLNGKADEL SEASDDNMDG
NEEVEEEEDD DEDEGDDGGG DLDVREYING EFDEEEEDTR AIDGFENVDP DEGTGSTSSE
YSD
//
