ID A0A061E5R3_THECC Unreviewed; 370 AA.
AC A0A061E5R3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=RNase H family protein, putative isoform 2 {ECO:0000313|EMBL:EOY00360.1};
GN ORFNames=TCM_010210 {ECO:0000313|EMBL:EOY00360.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY00360.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY00360.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001880; EOY00360.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061E5R3; -.
DR EnsemblPlants; EOY00360; EOY00360; TCM_010210.
DR Gramene; EOY00360; EOY00360; TCM_010210.
DR HOGENOM; CLU_052573_2_0_1; -.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 3.40.970.10; Ribonuclease H1, N-terminal domain; 1.
DR InterPro; IPR009027; Ribosomal_bL9/RNase_H1_N.
DR InterPro; IPR011320; RNase_H1_N.
DR InterPro; IPR037056; RNase_H1_N_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR46387; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46387:SF2; RNASE H DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01693; Cauli_VI; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF55658; L9 N-domain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 228..359
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 370 AA; 40577 MW; 2CDA05D1DB719645 CRC64;
MNCLSHVRAY GSAIFRKTGH FIETSTCNQC RFPSWKRNFQ HAGVKTVDLE FLLTRFHAQC
YSARKSSSGK KAPRTKKVDP EPVMENEKDA FYVVRKGDVV GVYKSFADCR AQVGPSICDP
PVSVYKGYSL TKDTKEYLVS CGLKNALYTV RAADVKEDLF GLLMPCSFQE PASSKGETSH
MDAAKKRSQD MLKSEYGGLG ALGSIAVADP VSKHIKLDPY AEVQIASSNC SCILEFDGAS
KGNPGPAGAA AVLRTDTGKV ICKLREGLGI ATCNAAEYRA VILGLKHALR KGYSSICVRG
DSKLVCMQMQ GLWKVKHEHM SELYEQAKKL KNKFLSFQIN HVLRELNAEA DAQANLAVNL
AEGQIQEELA
//
